Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 863 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  226 bits (576), Expect = 4e-63
 Identities = 219/850 (25%), Positives = 386/850 (45%), Gaps = 72/850 (8%)

Query: 14  LRWSLSEIRHGQ--LWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVSG 71
           LR +L E+R G    +     + L  A+I  + +L+Q + + I  QG++ L  D  F   
Sbjct: 28  LRLALREMRGGLRGFYIFLACIALGTAAIAGVNSLSQSISETIASQGQELLAGDIRFELN 87

Query: 72  NPLPESLLTLTAQQASQTSQMTRFATMAFSDQGMQ--LVTVKAVDSAYPLRGEMR----- 124
           N +  +      Q   Q S      +MA    G    LV +KAVD AYPL G++      
Sbjct: 88  NRVATADERAFLQGLGQVSVSAGLRSMARLPDGSNQALVELKAVDGAYPLYGKLESEPAK 147

Query: 125 -----LSDGQQTFNHVASNQLWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPGLSF 179
                L+   + F  VA+      P + ++LG+  G  + IG+A   +   +  EP    
Sbjct: 148 PLPELLAKDGEVFGAVAA------PLLLERLGISPGAEILIGNARIRIGATLASEPDALS 201

Query: 180 NPFQQMPSVYIHASDVDKTGAIQPGSRVQFSLFMTGDDSA-IESIKQQVSLT-ASDRWRD 237
           + F   P + I +  +  +G +Q GS V+ +  +   D A +  I+ Q      S  W  
Sbjct: 202 DGFGFAPRLMISSDALAASGLVQTGSLVEHTYKVRLPDPADVPLIRVQAETRFPSAGWSI 261

Query: 238 QESGSRT---NEVFERTQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGAS 294
           + SG+     N    R  Q+L+L     +++    +    + Y+  +   IA  K LGA 
Sbjct: 262 RTSGNAAPSLNANITRFSQFLTLVGLTALIVGGVGVANAVRSYLDGKRSVIATFKCLGAP 321

Query: 295 RRWLRRWLALQVGLLLVFAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALAS 354
              +      Q+ ++ +  + +G V+G  +  +    L  LLP    ++ L P  + LA+
Sbjct: 322 ASLVAMIYLAQILMIALIGIAIGLVLGALIPFVAAQFLAGLLPVST-AFVLYPSALGLAA 380

Query: 355 SF--LIAVPALGIPLGRLLSVSAVAVMQPVTAQTRWQRNLLLIMVPIVPLL--------- 403
            F  L A+    +PLGR   V A A+ +        Q+      +P +P L         
Sbjct: 381 LFGLLTALTFAILPLGRARRVPATALFR--------QQGFEPTGLPALPYLAGAFICLAA 432

Query: 404 ---LVYWQ--NQLIWIVLIGIVVL-FAMLAVVSVLVTRLLAKLPL--NPAMALALSRINR 455
              L  W   ++ I ++ +G +   F +L  VS+L++ L  + P   +PA+ LA+  I+R
Sbjct: 433 LAGLAVWTAYDRYISLIFLGAIAFAFIVLRGVSLLISWLARRSPRVNSPALRLAIGNIHR 492

Query: 456 SGAASGLQFGALALSLMLLAIIWLVRTDLLSDWQRTLPENAPNAFALNISESEKASYLAA 515
            GA +     +L L L LL  + L+  +L  +    + E APN F ++I  SE   + + 
Sbjct: 493 PGALTPSVVLSLGLGLALLVTLALIDGNLRRELTGDMAERAPNFFFVDIQGSEIEGFRSL 552

Query: 516 LDTASIE-RSAAYPIMRGRLTHINGQEAKQYAQNGEESSD-ALRRELNLTWAEQLPDYNP 573
           L  A  E +    P++RGR+  +NG++    ++N        LR +  +T+A   P+ + 
Sbjct: 553 LAGAMPEGKIIEVPMLRGRIVALNGEDVN--SRNVPPGGQWVLRGDRGITYARNRPENSK 610

Query: 574 ILQGEWQSQNG-----VSVEQEVASDLGLKLGDTLTFMINSQTVSAQVNTIRQVEWREMK 628
           + +G W  ++      VS   E A +LGLKLGDT+T  +  + ++A++   R+VEW  + 
Sbjct: 611 LTEGSWWPEDYGGEPLVSFSAEEARELGLKLGDTVTVNVLGRNITARIANFREVEWESLS 670

Query: 629 PNFYFIFSPDVVQNLPVSYLISFRIQP-----EHDALLGQLSRQHPTVSLMDIRTMGAKI 683
            NF  +FSP+     P ++L +  I P     E  A+L +++  +PT++ + ++     +
Sbjct: 671 INFVMVFSPNTFAGAPHAWLATI-IDPDASAEEEAAVLKRVTNAYPTITSVRVKDALDIV 729

Query: 684 QALLTQIVWSVTVLAALGVLAGVLLIFTLLRLSLSQRQQEIRLYRTLGASRRRVMHTIWA 743
             LL Q+  +V   AA+ ++A +L++   L      R  +  + +TLGA+R  ++     
Sbjct: 730 NTLLGQLATAVRAAAAVALIASILVLAGALAAGNRARIHDAVVLKTLGATRATLIRAFSY 789

Query: 744 EYGVMALVGGLVA----SVSADAVVAAVMKWGFSLTPSLHMALWFVLPALTFCTLAAVVS 799
           EY ++ L   + A     VSA  VV+ +M    S  P + +A   +   +T     A   
Sbjct: 790 EYVILGLATAVFALFAGGVSAWFVVSRIMTLPSSFLPDVAVATIVLALVVTVGIGLAGTW 849

Query: 800 SLLKRLLAPV 809
            +L +  APV
Sbjct: 850 RVLGQKAAPV 859