Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 847 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

 Score =  219 bits (559), Expect = 4e-61
 Identities = 214/832 (25%), Positives = 377/832 (45%), Gaps = 52/832 (6%)

Query: 14  LRWSLSEIRHGQL-WPVTVA-LTLIIASIFALTALAQRMEQVIVKQGRDALTADTVFVSG 71
           LR++L E+R G   + V +A L + +A+I A  ++ + +++ +    R  L  D      
Sbjct: 13  LRFALRELRAGLSGFRVLIACLAIGVAAIAAAGSVNRAIDEGLSANARQLLGGDLELRLM 72

Query: 72  NPLPESLLTLTAQQASQTSQMTRFATMAFSDQGMQ----LVTVKAVDSAYPLRGEMRLSD 127
                +    T ++    ++ T    M   +   +    LV +K V+  YPL G + L+D
Sbjct: 73  YRDLSAAEIATLERLGTLTRYTEMRAMVRPETNAEGRRLLVEMKGVEPGYPLYGAVELTD 132

Query: 128 GQQTFNHVASNQ----LWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPGLSFNPFQ 183
           GQ     +A           P + D+LG+ +GD + +GDA   + G +  EP      F 
Sbjct: 133 GQPLAGALAERDGLAGAVAAPALADRLGIKVGDRLRVGDAVVELRGVIAREPDAIGGAFS 192

Query: 184 QMPSVYIHASDVDKTGAIQPGSRVQFS--LFMTGDDSAIESIKQQVSLTASDRWR---DQ 238
             P + + A  V KTG IQPGS V++   L + G      +     +      WR    +
Sbjct: 193 FGPRLMVAAPTVAKTGLIQPGSLVEYHGLLRLEGGSDLARAKDILAAEHPQAGWRLRGPE 252

Query: 239 ESGSRTNEVFERTQQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWL 298
           E+G+      +R   +L L     +L+    +    + Y+  R  TIA+LK LGA    +
Sbjct: 253 EAGAGAQRFLDRLTLFLVLVGLTSLLVGGIGVANAVKAYLDGRIRTIAVLKCLGAPAGLI 312

Query: 299 RRWLALQVGLLLVFAVVLGSVIGVGLESLLRLPLKDLLPDPLPS-YGLRPLWIALASSFL 357
            R   +Q+GL+ +  V +G +IG  L  L    L DLLP P  +     PL +A A   L
Sbjct: 313 FRVYMIQIGLISLAGVGIGLLIGAALPPLAIALLADLLPVPAEAGVFAGPLLLAAAFGLL 372

Query: 358 IAVPALGIPLGRLLSVSAVAVMQPVTAQ---TRWQRNLLLI--MVPIVPLLLVYWQNQLI 412
            A+      L R   + A A+ +  +A+    RW+  L++    + +  L +    ++ +
Sbjct: 373 TALVFSLGALSRARDIPATALFRGESAKGRGGRWRDRLMIAAGALTLAALAVATADDKPL 432

Query: 413 --WIVL-IGI-VVLFAMLAVVSVLVTRLLAKLPLNPAMALALSRINRSGAASGLQFGALA 468
             W V   G+ ++LF   A +  L+ +   +    PA+ LAL+ ++R GAA+     +L 
Sbjct: 433 AAWFVAGAGLALLLFRGAAALVGLLAKAAGRPSGLPALRLALTNLHRPGAATTSVVLSLG 492

Query: 469 LSLMLLAIIWLVRTDLLSDWQRTLPENAPNAFALNISESEKASYLAALDTASI-ERSAAY 527
           L L +L  I L++ +L    +  +P  AP  F ++I   + A++ AA+  A    +    
Sbjct: 493 LGLSVLVAIALIQGNLDRQIREGIPAQAPTFFFIDIQPQQTATFEAAVHGADPGAKVVLA 552

Query: 528 PIMRGRLTHINGQEAKQYAQNGEESSDALRRELNLTWAEQLPDYNPILQGEW-----QSQ 582
            ++RGR+   NG    +  +   E+  A+R +   + AE LP+ + +  G W     Q  
Sbjct: 553 DMIRGRIRAFNGVPVAE-ERIAPEARWAVRGDRGFSTAETLPEGSTLQAGAWWPADYQGP 611

Query: 583 NGVSVEQEVASDLGLKLGDTLTFMINSQTVSAQVNTIRQVEWREMKPNFYFIFSPDVVQN 642
              S+  ++A  +GL  GD +T  I  + ++  +   R+V+W  +  NF F+ SP     
Sbjct: 612 PLFSLTSDLAEGMGLAPGDAVTVNILGRDLTGTLANTRKVDWGSLTMNFAFVVSPGAFAG 671

Query: 643 LPVSYLISFRIQPEHDALLGQLSRQ----HPTVSLMDIRTMGAKIQALLTQIVWSVTVLA 698
            P SY+ + R     +AL   + +      P VS + +R     + A++     +V + A
Sbjct: 672 APRSYIATVRAS---EALASDVDKAVAAVLPNVSAIRVRDALDTVTAIMEGAGNAVRISA 728

Query: 699 ALGVLAGVLLIFTLLRLSLSQRQQEIRLYRTLGASRRRVMHTIWAEYGVMALVGGLVASV 758
            L ++AG +++      +  +R +E    + LGA+R +++     EYG++ L  GL+A  
Sbjct: 729 LLTLIAGAVVLGGAFAANHGRRLREAVTLKVLGATRGQILRAYLTEYGILGLATGLIA-- 786

Query: 759 SADAVVAAVMKWG---FSLTPSLHMALWFVLPALTFCTLAAVVSSLLKRLLA 807
              A+V +V  WG   F+L      A W +LP +   T    V + +   LA
Sbjct: 787 ---ALVGSVAAWGVLVFAL-----RADWVLLPGVVATTAVGCVLATMAAGLA 830