Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 856 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  199 bits (507), Expect = 4e-55
 Identities = 189/804 (23%), Positives = 367/804 (45%), Gaps = 49/804 (6%)

Query: 14  LRWSLSEIRHGQ--LWPVTVALTLIIASIFALTALAQRMEQVIVKQGRDALTADTVF--V 69
           LR++L E+R G    +     + L + +I  + ++A  +   + ++GR  L  D  F  +
Sbjct: 18  LRYALREMRGGLNGFYVFIACIALGVMAIAGVGSVAASLGDGLAREGRTLLGGDAAFSLI 77

Query: 70  SGNPLPESLLTLTAQQASQTSQMTRFATMAFSDQGMQ-LVTVKAVDSAYPLRGEMRLSDG 128
                P  +  L ++     S       MA +D G   LV +KAVD AYPL G+++L   
Sbjct: 78  QREATPNEVAFLRSR--GDVSVAATMRGMARTDDGRSALVELKAVDGAYPLLGDLKLEPP 135

Query: 129 QQTFNHVASNQ----LWLEPRVKDQLGVDIGDNVTIGDADFVVSGEVLEEPGLSFNPFQQ 184
               + +A          +P +  +L + IGD VTIG A F +   V  EP         
Sbjct: 136 MPVADLLARRDDAFGAAADPALLARLDLKIGDKVTIGSATFQIRSAVAAEPDKLSGNIGF 195

Query: 185 MPSVYIHASDVDKTGAIQPGSRVQFSLFM------TGDDSAIESIKQQVSLTASDRWRDQ 238
            P   I    +  T  +QPGS V+++  +      T D +A   +    +      W  +
Sbjct: 196 GPRFLISDDGLRATQLLQPGSLVRWTYRVRLPDNGTDDRAAQRLVDDTRAALPQAGWEIR 255

Query: 239 ESGSRTNEVFERT----QQYLSLTVAIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGAS 294
             G+ + ++ ERT     Q+L+L     +++    +    + ++  R   IA LK++GA+
Sbjct: 256 TRGNASPQL-ERTITRFTQFLTLVGLAALVVGGVGVANAVKSHIDRRRDVIATLKAVGAT 314

Query: 295 RRWLRRWLALQVGLLLVFAVVLGSVIGVGLESLLRLPLKDLLPDPLPSYGLRPLWIALAS 354
            R +      QV +L +   V+G  +G  +   L      LLP P+ +  L P  +AL+ 
Sbjct: 315 GRDVFAIYLTQVIVLALIGAVIGLALGAAMPFALVGLFGQLLPLPVVA-ALHPGELALSL 373

Query: 355 SF-LIAVPALGI-PLGRLLSVSAVAVMQPVTAQTRWQ---RNLLLIMVPIVPLLLVY--- 406
            + L+   A G+ PL ++  V    + +        +   R++ LI   +  LL V    
Sbjct: 374 VYGLLTALAFGLWPLAQVRDVPVATLFREAATADSHRPRLRHVALIAAVVAVLLAVVVGL 433

Query: 407 -WQNQLIWIVLIGIVVLFAMLAVVSVLVTRLLAKLPLN--PAMALALSRINRSGAASGLQ 463
            +  ++   V+   + +F +L  V+  +  +  +LP +    + LA++ I+R GA +   
Sbjct: 434 AYDKRVALAVIGATLAIFVLLRGVAAGLMAIARRLPRSRITMLRLAIANIHRPGALTPSV 493

Query: 464 FGALALSLMLLAIIWLVRTDLLSDWQRTLPENAPNAFALNISESEKASYLAALDTASIER 523
             +L L L +L  +  +  +L   +   LPE AP  F ++I  SE   +   L   +   
Sbjct: 494 VLSLGLGLAVLVTVSQIDGNLRRQFSAALPEKAPTFFFIDIPSSETDQFGTFLRQIAPNA 553

Query: 524 SAA-YPIMRGRLTHINGQEAKQYAQNGEESSDALRRELNLTWAEQLPDYNPILQGEWQSQ 582
           +    P++RGR+    G   +   +   ++   L+ +  LT+A  +P  + +++G W  +
Sbjct: 554 TLEDVPMLRGRIVAARGVRVEDL-KPAPDAEWVLQSDRGLTYAADIPAGSKVVEGRWWPK 612

Query: 583 NG-----VSVEQEVASDLGLKLGDTLTFMINSQTVSAQVNTIRQVEWREMKPNFYFIFSP 637
           +      VS ++++A  LGL +GD +T  +  + ++A ++ +R ++W+ +  NF  +FSP
Sbjct: 613 DYSGPPLVSFDKKLAQGLGLSIGDKVTVNVLGREITATISNLRSIDWQSLGINFVLVFSP 672

Query: 638 DVVQNLP---VSYLISFRIQPEHD-ALLGQLSRQHPTVSLMDIRTMGAKIQALLTQIVWS 693
           D  +  P   ++ L      P+ D A++ Q++ + P V+ + +R     +  +++ +V +
Sbjct: 673 DTFRGAPHTHIATLTESGSTPQSDAAVIKQVADRFPMVTSVRVREALETVGGVVSNLVLA 732

Query: 694 VTVLAALGVLAGVLLIFTLLRLSLSQRQQEIRLYRTLGASRRRVMHTIWAEYGVMALVGG 753
           V   +A+ +++ +L++   L      R  +  + +TLGA+R R++     EY ++ L   
Sbjct: 733 VRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGATRARLIGAFALEYALIGLATA 792

Query: 754 ----LVASVSADAVVAAVMKWGFS 773
               L  S +A  +V  +M   F+
Sbjct: 793 AFAVLAGSAAAWLIVTRLMTLSFA 816