Pairwise Alignments

Query, 815 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

 Score = 43.9 bits (102), Expect = 2e-08
 Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 36/228 (15%)

Query: 152 VDIGDNVTIGDADFVVSGEVLEEPGLSFNPFQQMPSV--YIHASDVDKTGAIQPGSRVQF 209
           +DIGD + I D  + V G +LE+ G   NP      V  Y  AS+V            ++
Sbjct: 165 IDIGDKIEINDKKYKVVG-ILEQIG---NPDDDNSIVIPYEAASEVFDVDD-------EY 213

Query: 210 SLFMT--GDDSAIESIKQQVSLTASDRWRDQESGSRTNE--------VFERTQQYLSLTV 259
           ++FM    D   +  + + +     D   D+     T E        +F     +L    
Sbjct: 214 NMFMVKIKDGEDVTKVSEDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVA 273

Query: 260 AIVILMAATTLVLTCQHYVSTRTHTIAMLKSLGASRRWLRRWLALQVGLLLVFAVVLGSV 319
            I +L+ A  +  T    +  R   I +LK+LGA    +     ++ G L +F  ++G++
Sbjct: 274 GISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTI 333

Query: 320 IGVGLESLLRLPLKDLLPDPLPSYGLRPLWIA-------LASSFLIAV 360
           +G+ +   +           +  YGL   WI+       L  SF++ +
Sbjct: 334 LGILIAKAIEYVA------AISGYGLIRAWISWELIVGVLVFSFVVGI 375



 Score = 43.5 bits (101), Expect = 2e-08
 Identities = 21/103 (20%), Positives = 50/103 (48%)

Query: 665 SRQHPTVSLMDIRTMGAKIQALLTQIVWSVTVLAALGVLAGVLLIFTLLRLSLSQRQQEI 724
           SR     S++    +   I ++ + +   +  +A + +L G + I   + +S+ +R+++I
Sbjct: 240 SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDI 299

Query: 725 RLYRTLGASRRRVMHTIWAEYGVMALVGGLVASVSADAVVAAV 767
            + + LGA    ++     E G + L GG+V ++    +  A+
Sbjct: 300 GILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAI 342