Pairwise Alignments

Query, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., Lactam utilization protein LamB from Pseudomonas fluorescens FW300-N2E2

 Score =  268 bits (685), Expect = 8e-77
 Identities = 129/240 (53%), Positives = 173/240 (72%), Gaps = 2/240 (0%)

Query: 8   LNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGAHPS 67
           LNCD+GESFG WTMG D EVMP+ID ANIACGFHA DP +M +T+ LAL H V IGAHP+
Sbjct: 6   LNCDIGESFGNWTMGLDAEVMPFIDCANIACGFHAGDPSIMRKTVSLALSHGVRIGAHPA 65

Query: 68  YPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSDPSI 127
           Y DL GFGRRS+A   QE+ +++ YQ+GAL  +C ++ G++SYVKPHGA+YNDMM++P+ 
Sbjct: 66  YQDLAGFGRRSMAYGAQELQDLLHYQIGALDGICRAQGGRVSYVKPHGAMYNDMMANPAQ 125

Query: 128 FRAVVDAVSCFN--LPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTPRSQ 185
            RAV+ AV+ ++  LPLM++A+ +N     + D + + L FEAFADR Y + G+L  R  
Sbjct: 126 LRAVIQAVAAYDRQLPLMLMATRDNSAAQALGDEYGLTLWFEAFADRAYDSAGRLVSRQA 185

Query: 186 PNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRAALD 245
           P AV    E I+ Q   IAR   +T+SDG  + + A+TLCVHGDN ++V+ + RIR ALD
Sbjct: 186 PGAVHHDPEVIVGQALAIARGNALTASDGSALHLIANTLCVHGDNASSVAAVQRIREALD 245