Pairwise Alignments

Query, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., LamB/YcsF family protein from Rahnella sp. WP5

 Score =  180 bits (456), Expect = 3e-50
 Identities = 88/241 (36%), Positives = 149/241 (61%), Gaps = 1/241 (0%)

Query: 6   IQLNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGAH 65
           I LN D+GE FG +T+  D  +MP I  AN+ACGFHA D  +M++T+ LA +++V +GAH
Sbjct: 4   IDLNADIGEGFGDYTIADDAALMPLITSANVACGFHAGDAVIMAKTVALAKKYQVDLGAH 63

Query: 66  PSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSDP 125
             +PDL GFGRR + +  + ++  + YQ+GAL A  ++ +  L+++  HGAL N +  D 
Sbjct: 64  VGFPDLSGFGRRRMHIEPEVMAHYVTYQLGALSAFAKAADYPLTHMSFHGALGNMVSEDA 123

Query: 126 SIFRAVVDAVSCFNLPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTPRSQ 185
            + R ++ AV  F+   M++++        +A   D+P++    ADR Y +NG L  R++
Sbjct: 124 RLARVLLQAVKNFDAQ-MIISTMPGNAVERMARALDLPVICTFLADRAYESNGLLVSRTK 182

Query: 186 PNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRAALD 245
           P+AV+  +E +  ++RQ+ R G V S DG  +P++A ++ VHGD P ++ ++  +R  + 
Sbjct: 183 PDAVIHDKEQVRARIRQLLREGTVQSIDGVTLPVDATSILVHGDTPESLEMVHTLREIIA 242

Query: 246 E 246
           E
Sbjct: 243 E 243