Pairwise Alignments

Query, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., LamB/YcsF family protein (RefSeq) from Shewanella loihica PV-4

 Score =  186 bits (472), Expect = 4e-52
 Identities = 103/242 (42%), Positives = 141/242 (58%), Gaps = 10/242 (4%)

Query: 6   IQLNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGAH 65
           I LN D+GE         DE ++  +  ANIACG HA D   M  T+ LA  H V +GAH
Sbjct: 8   IDLNADLGEGGP-----QDEALLTLVTSANIACGGHAGDRQSMLATVKLAKAHHVKVGAH 62

Query: 66  PSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSDP 125
           PSYPD   FGR S+A+  + +   +L Q+ ALKA+C+     L +VKPHGALYND   DP
Sbjct: 63  PSYPDRANFGRLSIAIEAEPLFNSLLQQINALKAVCDELGVDLHHVKPHGALYNDAAQDP 122

Query: 126 SIFRAVVDAVSCFN--LPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTPR 183
           ++ R ++  +   N  L LM+LA +     +  A R  + ++ EAFADR YLA+G+L PR
Sbjct: 123 ALGRILIRVIETINPTLKLMILAGS---PLVMQARRAGLEVIEEAFADRGYLADGRLAPR 179

Query: 184 SQPNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRAA 243
           SQP A++   + +L QV  I    KVT+  G  +   A +LC+HGD P A+     IRA+
Sbjct: 180 SQPGALIEDAQKVLEQVSSIVEEQKVTAVTGESVSCHATSLCLHGDTPKALEFARAIRAS 239

Query: 244 LD 245
           LD
Sbjct: 240 LD 241