Pairwise Alignments

Query, 246 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., LamB/YcsF family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  164 bits (415), Expect = 2e-45
 Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 5/244 (2%)

Query: 5   TIQLNCDMGESFGVWTMGADEEVMPWIDMANIACGFHASDPHVMSRTIDLALEHEVMIGA 64
           T+ LN DMGESFG W MG D  ++  I  ANIACG HA D  VM+RT+ LA+E+ V IGA
Sbjct: 4   TVDLNADMGESFGPWPMGDDAALLRTITSANIACGAHAGDWDVMARTMALAVENGVGIGA 63

Query: 65  HPSYPDLQGFGRRSLAMNEQEVSEIILYQVGALKALCESKNGQLSYVKPHGALYNDMMSD 124
           HP  PDLQGFGRR + M    +  ++ +QVGA +A+     G + +VK HGAL N    D
Sbjct: 64  HPGLPDLQGFGRRRMQMPHDSLRNLVAWQVGAAQAMARQAGGAVRHVKLHGALANMCSED 123

Query: 125 PSIFRAVVDAVSCF--NLPLMVLASANNQDYLDIADRFDVPLLFEAFADRTYLANGKLTP 182
             + RA  +       ++ +MVLA+   Q      +        E FADR Y  +  L  
Sbjct: 124 AEMARACYEGALAADPDVIIMVLAATAQQ---TAVEALGCRWAAEIFADRAYNDDATLVD 180

Query: 183 RSQPNAVLSSEEAILNQVRQIARYGKVTSSDGFVIPIEADTLCVHGDNPNAVSLIARIRA 242
           R  P AV+   +    ++ ++ + G + +  G  I    DT+C+HGD   AV +    RA
Sbjct: 181 RRLPGAVIHDPDRAGARMVEMVKAGAIITESGAHISTPIDTICLHGDTAEAVGIARATRA 240

Query: 243 ALDE 246
           AL++
Sbjct: 241 ALED 244