Pairwise Alignments

Query, 338 a.a., UDP-glucose 4-epimerase GalE from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., NAD dependent epimerase/dehydratase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  100 bits (248), Expect = 7e-26
 Identities = 89/350 (25%), Positives = 147/350 (42%), Gaps = 39/350 (11%)

Query: 1   MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNL--YNSKVTVLDRIEKVIGVRP-QFVQG 57
           MK LVTG  G+IG++   ++   G   V +DNL  Y      L R+  +  +    F++ 
Sbjct: 1   MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60

Query: 58  DIRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK 117
           D+ D+  +  L  Q   + V+H A    V  S+  PL Y D+N+ G L ++   R   ++
Sbjct: 61  DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120

Query: 118 SLVFSSSATVYGEPTSVPI-TESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
            LV++SS++VYG    +P  TE       + Y  +K    E ++           T LR+
Sbjct: 121 HLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATK-KANELMSHTYSHLYQLPTTGLRF 179

Query: 177 FNPVGSHPSGELGEDPQGIPN-NLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHV 235
           F   G          P G P+  L  F   +  G  E + V+        G   RD+ ++
Sbjct: 180 FTVYG----------PWGRPDMALFKFTKAILAG--ETIDVY------NHGDLSRDFTYI 221

Query: 236 MDLADGHIAALKK---------------VGTCAGLHIYNLGTGKGYSVLDVVKAFETASG 280
            D+ +G I    K                 + A   ++N+G G    +LD + A E A G
Sbjct: 222 DDIVEGIIRVQDKPPSPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALG 281

Query: 281 RTVPYKLVDRRPGDIAEYWADPTKAAQDLGWKATRNLHTMAQDAWCWQSN 330
                + +  +PGD+   WAD     + +G+K+  ++ T       W  N
Sbjct: 282 IEAKKQFLPMQPGDVHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRN 331