Pairwise Alignments

Query, 338 a.a., UDP-glucose 4-epimerase GalE from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., polysaccharide biosynthesis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (255), Expect = 1e-26
 Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 26/333 (7%)

Query: 4   LVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIG----VRPQFVQGDI 59
           L+TG  G+IGS+   Q+++   T + LDN    +   LD ++ ++     +R  F+ GDI
Sbjct: 19  LITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFINGDI 78

Query: 60  RDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSL 119
           RD A+   ++  + ++ V+H A L +V  S+  P+     N+ G L ++ A +EA VKS 
Sbjct: 79  RDYAICEAVV--NGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVKSF 136

Query: 120 VFSSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECLTDFQKANPDWSITLLRYFNP 179
            +++S++ YG+  ++P  E       +PY  +K  V E           +    LRYFN 
Sbjct: 137 TYAASSSTYGDHPALPKVEQNIGNPLSPYAVTK-YVNELYASVYARTYGFETIGLRYFNV 195

Query: 180 VGSHPSGELGEDPQGIPNNLMPFVTQVAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDLA 239
            G        +DP G    ++P  T   + + E + + G      DG   RD+ ++ ++ 
Sbjct: 196 FGRR------QDPNGAYAAVIPKWTSSMI-KGEDVFING------DGETSRDFCYIDNVV 242

Query: 240 DGHIAALKKVGTCAGLHIYNLGTGKGYSVLDV---VKAFETASGRTVPY--KLVDRRPGD 294
             +I A       A   +YN+  G   ++ D+   +K    A+G  V       D R GD
Sbjct: 243 QMNILAATAASE-AKNEVYNVAVGDRTTLNDLYFAIKDSLNANGINVNQNPNYRDFRAGD 301

Query: 295 IAEYWADPTKAAQDLGWKATRNLHTMAQDAWCW 327
           +    AD +KA   LG++ T  +     +A  W
Sbjct: 302 VRHSQADVSKAVTRLGYQYTHKILEGISEAMPW 334