Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  195 bits (496), Expect = 4e-54
 Identities = 118/312 (37%), Positives = 184/312 (58%), Gaps = 8/312 (2%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           EGDLT RL     R+E G I    +  +  L  +I  V  +   + D +   A     ++
Sbjct: 398 EGDLTQRLNID-SRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTADIAIRTD 456

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
             +Q Q + ++ VATA+ EMTA+A +V+  + +A E      +   + +  V+     I 
Sbjct: 457 KGVQTQLAEIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQDTGATIA 516

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
           +L+  I +A   V+TL  ++  I+A++ TI +I+EQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 517 ELASEIGRAVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGEQGRGFAV 576

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQA 400
           VADEVR LA +TQ AT EIQ MI++LQ  ++++ ++ EQ+ ++   S +        +QA
Sbjct: 577 VADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADAAAEALQA 636

Query: 401 IAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQA 460
           I  +  LIND++ QI+++A EQS+VA DI+  +++I        +VA+Q + G  E +QA
Sbjct: 637 ITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNI-------GQVAQQVAAGADEASQA 689

Query: 461 TRNLGEILARYR 472
           +  L  +  + R
Sbjct: 690 SAGLTRLAEQQR 701