Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  184 bits (466), Expect = 1e-50
 Identities = 136/436 (31%), Positives = 216/436 (49%), Gaps = 19/436 (4%)

Query: 37  AGMRYWHTLASIEQQSQLAVEYKLQGLLNHPDPSQLSVLKVQNRVSDTIYSQGVVTASAT 96
           AG      LA+++Q   L V             SQL     Q R S    S  +VT++  
Sbjct: 225 AGPAVDEALAALQQYKSLMVSI-----------SQLMQQNDQIRDSLRQQSMDIVTSAEK 273

Query: 97  SANGQAYAYTESMKQYEQPAREQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTT 156
              GQ      S  + +  A  Q L   ++  L  I  AI    +   I   L       
Sbjct: 274 LMAGQVV----SANKEKDSAVTQLLTVAVIVLLLGIFAAIL---ITRQITRPLDSTVIAA 326

Query: 157 QKIAEGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEV 216
           ++IA+GDLT+ L     +DE G +   +     +L  LI  +      +   A   +   
Sbjct: 327 RRIADGDLTNDLST-TRQDELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVS 385

Query: 217 KESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAI 276
           +++   +  Q   +D VATAM +M ++  EV+  ++ A++   Q + +       V+ A 
Sbjct: 386 EQTSAGVTQQKLEVDQVATAMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHAT 445

Query: 277 QDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGR 336
           ++I QL+  + Q   +++ L  ++ +I  VI  I A++EQTNLLALNAAIEAARAGEQGR
Sbjct: 446 REISQLAGEVGQLGEAMQRLIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGR 505

Query: 337 GFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGN 396
           GFAVVADEVR+LA RTQS+T EI+A+I+ LQ  +   ++L   +  +   +  L  +   
Sbjct: 506 GFAVVADEVRSLAQRTQSSTTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEE 565

Query: 397 DVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSE 456
            +  I HS   I  +S QIS +A EQS+V  +I+  +  +R  ++      EQ++    E
Sbjct: 566 SLLEITHSIVTIEQMSQQISAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVE 625

Query: 457 ITQATRNLGEILARYR 472
           + +   NL +++AR+R
Sbjct: 626 LARLGSNLQDMVARFR 641