Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  183 bits (464), Expect = 2e-50
 Identities = 117/361 (32%), Positives = 189/361 (52%), Gaps = 5/361 (1%)

Query: 116 AREQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYT----TTQKIAEGDLTSRLGFH 171
           AR  A  S  +     +   I   W+A+ I   + V       T   ++  DLT+R  + 
Sbjct: 292 ARSSAQSSLYVAVAIVVLMLIVVLWLASVIIRNIKVAVVDVNRTLMALSTRDLTARTRYI 351

Query: 172 PGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLD 231
            G+DEFG I   LD     ++E+I  +   +A +   A   +    ++   +  Q    D
Sbjct: 352 -GKDEFGEISRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTD 410

Query: 232 SVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASS 291
            VATA+ EM+A+  +V+ ++  A E +++      + +  +   I  I++LS    + S 
Sbjct: 411 QVATAISEMSATVKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQAEETSR 470

Query: 292 SVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR 351
            ++ L   +  I++V+  I  +++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +
Sbjct: 471 IIDELKGESNSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKK 530

Query: 352 TQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDL 411
           TQ +TV IQ MI  LQ  S+  A   ++T+ +A   +  V   G  ++ IA     I+D 
Sbjct: 531 TQDSTVSIQKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIATISDR 590

Query: 412 SVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARY 471
           ++Q++++A EQS VA +I   + DI S    +   AEQT+    E+ +       ++ R+
Sbjct: 591 NIQVASAAEEQSLVAEEIHRNVDDINSLVIQVSAGAEQTAVTSRELARLAEQQQGLVGRF 650

Query: 472 R 472
           +
Sbjct: 651 K 651