Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  189 bits (479), Expect = 3e-52
 Identities = 139/448 (31%), Positives = 225/448 (50%), Gaps = 26/448 (5%)

Query: 42  WHTLASIEQQSQLAVEYKLQGLLNHPD-PSQLSVLKVQNRVSDTIYSQGVVTASATSANG 100
           + TL + +Q+ QL +  K     ++ D  SQL +L+   +  DT     +V         
Sbjct: 100 YETLIASDQERQLFLAVKK----SYDDYASQLDLLEPLLKAGDTASIVKLVATGIRPLTN 155

Query: 101 QAYAYTESMKQYEQPARE-------QALRSFLLTYLWAIPF-AIFTYWVATF-------- 144
           Q     E + Q+             Q   S L   +  I F A+ T  +AT         
Sbjct: 156 QMETQVEELTQFNNKGAALAGVQATQVYDSGLYIVIGLIIFVALLTLCLATLLTKTITSP 215

Query: 145 IGGALWVLYTTTQKIAEGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSAT 204
           IG AL V     ++IA  DLT  +    G DE G +  AL      L   I+ +  +S+ 
Sbjct: 216 IGSALSV----AERIASSDLTKEVEVS-GTDEAGRLLSALATMQQNLRSTIMQIADSSSQ 270

Query: 205 LRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQ 264
           L   +       ++S + + +Q   ++  ATA+ EM+A+  EV+  ++ A+E++ +    
Sbjct: 271 LAAASEEMTAVTEQSSLGLVSQNDEVNQAATAVTEMSAAVDEVARNAESASEESRKGQGY 330

Query: 265 VERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNA 324
            E   +RV + ++ IE+LS  +   S  +  L+  A  I+ V+  I AI+EQTNLLALNA
Sbjct: 331 TEVGLERVSQTLKSIEKLSSNVRDTSEQITGLSNRAQNISKVVEVIRAIAEQTNLLALNA 390

Query: 325 AIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQA 384
           AIEAARAGEQGRGFAVVADEVR LA RTQ +T EI+ MI+ +Q +S    K    +   A
Sbjct: 391 AIEAARAGEQGRGFAVVADEVRALAHRTQVSTQEIEQMIQAIQNDSDQAVKAMATSRELA 450

Query: 385 HTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLR 444
             S  +  +  + +  IA +   IN+ ++ I+T++ EQ+ VA ++   L  IR  ++   
Sbjct: 451 AESLSVAGDASSSLDQIATAITGINERNILIATASEEQAHVAREVDRNLVSIRELASQSS 510

Query: 445 RVAEQTSQGVSEITQATRNLGEILARYR 472
             A QT+   +E+++   +L +++ R++
Sbjct: 511 AGASQTASACNEMSKLAVSLNQLVNRFK 538