Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  182 bits (463), Expect = 2e-50
 Identities = 123/396 (31%), Positives = 200/396 (50%), Gaps = 8/396 (2%)

Query: 77  VQNRVSDTIYSQGVVTASATSANGQAYAYTESMKQYEQPAREQALRSFLLTYLWAIPFAI 136
           VQ R   T   Q +V  S      Q     +   Q    AR   +   LL  +  I  A+
Sbjct: 252 VQARKEMTTQGQDIVKISEDMYKLQL----DRRDQESAQARTTQITCTLLAIILGIIAAV 307

Query: 137 FTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIV 196
               +   I   L        +IA GDLT  L      DE G +   + +   TL ELI 
Sbjct: 308 I---ITRQITRPLRETLAVVDRIASGDLTQTLAVTRS-DELGVLQQGIQRMGTTLRELIG 363

Query: 197 AVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATE 256
            ++ +   +   A   +   +++   + +Q    D VATAM EM+A+ AEV+  +++A++
Sbjct: 364 GIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMSATVAEVARNAEQASQ 423

Query: 257 QTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQ 316
                 ++     + V +AI  IE+L+  + ++  ++  L   + +I  V+  I A++EQ
Sbjct: 424 AASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQESDKIGKVMDVIKAVAEQ 483

Query: 317 TNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKL 376
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ +TVEI+ ++  LQ  ++ ++ +
Sbjct: 484 TNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEIETLVAALQSGTRQVSSI 543

Query: 377 TEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDI 436
              +     +S  L  + G  + +I  +   I  ++ QI+ +A EQS+VA +IS  + ++
Sbjct: 544 MLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAAEEQSAVAEEISRSIVNV 603

Query: 437 RSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYR 472
           R  S      +E+T+    E+ +    L  +++R+R
Sbjct: 604 RDVSEQTASASEETAASSVELARLGGQLQTMVSRFR 639