Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  199 bits (506), Expect = 2e-55
 Identities = 118/357 (33%), Positives = 194/357 (54%), Gaps = 3/357 (0%)

Query: 118 EQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEG--DLTSRLGFHPGRD 175
           E AL+    T L A+ F + + +VA+ +   +  +    + I EG  DL  RL    G D
Sbjct: 280 EAALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQ-GED 338

Query: 176 EFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVAT 235
           E   +    +  +  + + ++ V Q S  L  +A+  + + +++    Q+Q      V T
Sbjct: 339 ELAQLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVT 398

Query: 236 AMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVET 295
           A+ EM A+  E++  + +A E  +   +     Q+ V +A   I QLS+ ++Q    +E+
Sbjct: 399 AINEMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIES 458

Query: 296 LNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSA 355
           L T+   I +++  I AISEQTNLLALNAAIEAARAGE GRGFAVVADEVR LASRT ++
Sbjct: 459 LATHTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAAS 518

Query: 356 TVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQI 415
           T E+Q MI+KLQ ES        Q+ S++      V E  N +  I+    LI+D+++Q+
Sbjct: 519 TDEVQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQV 578

Query: 416 STSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYR 472
           + +  EQS+V  DI+  +++I   +      A+  ++   ++      L +++AR++
Sbjct: 579 AAATEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDLNALATRLDQLVARFK 635