Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  191 bits (486), Expect = 4e-53
 Identities = 121/350 (34%), Positives = 199/350 (56%), Gaps = 8/350 (2%)

Query: 112 YEQPAR----EQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIA--EGDLT 165
           Y Q AR    E+A+  F+++ + A    I  +  A  +   +  +  +   IA  EGDLT
Sbjct: 192 YSQSARQAMWEKAVAIFMMSLVLAFITLIAIWSAAHRMVKPIRAMVDSLNDIAKGEGDLT 251

Query: 166 SRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQN 225
           +RL    G DE   +G A ++ +D L  +I  V   +  ++  A+    +  E   Q+ +
Sbjct: 252 ARLSVR-GEDEIAELGIAFNQFVDKLQGIIRDVADTTGRVKQAAVDIDRQTSEMANQLNS 310

Query: 226 QYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRY 285
             +  D V TA+ EM+++AAEV+  + +  E T+  T  V ++Q  V  ++ +I  L   
Sbjct: 311 HNNETDQVVTAITEMSSTAAEVAQNTTQVAEATQAATGDVAKAQACVDTSLAEISNLMSQ 370

Query: 286 IAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 345
           +  A++++++L+  + +IN+V++ I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 371 VNDAAANIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 430

Query: 346 RTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSA 405
           R LASRTQ++T+EI  M+  L     +  K  +++      S +  + +   + ++  + 
Sbjct: 431 RNLASRTQASTLEINEMLTDLHRLVSSAVKTMDESQHSCQRSVEASTAISESLGSVTSAV 490

Query: 406 QLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVS 455
             IND+S QI+ +A+EQSSV  +I+  +  I+   N L  V+ Q ++ VS
Sbjct: 491 TAINDMSTQIAAAATEQSSVTEEINRNVYAIQEIVNAL-LVSSQEARTVS 539