Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  186 bits (472), Expect = 2e-51
 Identities = 123/367 (33%), Positives = 195/367 (53%), Gaps = 19/367 (5%)

Query: 117 REQALRSFLLTYLWAIPFAIFTYWVATFIG-----GALWVLYTTTQKIAE----GDLTSR 167
           REQ       +  W I  A+F   + +F G     G +  +    QK+ +     D+T  
Sbjct: 177 REQVETLHSSSLKWFIGLAVFAVLITSFFGVWVNRGVMTPVTEIRQKLRQIREKSDMT-- 234

Query: 168 LGFHPGRD-EFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQ 226
           + F   RD E G I   L+  ++ L  ++  + + ++TL D+A       +++  ++  Q
Sbjct: 235 VSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQ 294

Query: 227 YSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYI 286
            S  +  ATAM EMTA+ AEV+ +S  A E      +   R    V+++I  +  L+  I
Sbjct: 295 QSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQI 354

Query: 287 AQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 346
              ++ +  L T +  I  V+  I +I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 355 QGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 414

Query: 347 TLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQ 406
           TLA RT  +T EI++MIE LQ   ++     EQ ++Q   +++  +  G+ +Q I  S  
Sbjct: 415 TLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVD 474

Query: 407 LINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGE 466
            I  L+  I+T+A EQS VA  I+  +  I         +A++++Q  +++++A   L +
Sbjct: 475 SITQLNTHIATAADEQSCVAESINQSIIAISD-------IAQESTQAANDLSEAVHQLAQ 527

Query: 467 ILARYRT 473
           +    RT
Sbjct: 528 LAGHMRT 534