Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  173 bits (439), Expect = 1e-47
 Identities = 119/369 (32%), Positives = 192/369 (52%), Gaps = 15/369 (4%)

Query: 112 YEQPAREQALRSFLLTYLWAIPFAIFTYWVATFI--------GGALWVLYTTTQKIAEGD 163
           Y Q   E A+ + ++  + A+  AI   W+A  +        GG    + +  ++IA G+
Sbjct: 287 YAQQKSENAIDTVVVVAIAAMLMAI---WLAITVVRAIRRPVGGEPREIASIAREIAGGN 343

Query: 164 LTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQI 223
           L    G +  R+    I  A+ +  D L  ++  +   S TL D++       +ES    
Sbjct: 344 L----GQNFLREGSTGIYAAMAEMNDNLRRIVSELNDASRTLGDSSSGMLGVTEESRKNS 399

Query: 224 QNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLS 283
           ++Q   L   A+AM+EMT +  +++  +QRA+E   +     +     V    + I  L 
Sbjct: 400 ESQADQLAHTASAMQEMTHTVDDIARNAQRASEMASEADHHAQEGMGVVEDTRRSIMVLV 459

Query: 284 RYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVAD 343
             I   S  +E L      + +++  I  I+EQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 460 DNITDVSGIIENLEKETENVGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 519

Query: 344 EVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAH 403
           EVR LASRTQ++T EIQA+I +LQ ES+   +     V++A  +S+  ++    + AIA 
Sbjct: 520 EVRNLASRTQNSTEEIQALIGRLQAESRRSVESMRVNVTEATQTSEKANKAIAALGAIAD 579

Query: 404 SAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRN 463
           S   I D++ QI+ +A EQ++V   I+  + +I   +      +EQ     + I++ +  
Sbjct: 580 SVMAIRDMNHQIAVAAEEQATVVGTINVSVEEISGLARMNAAGSEQVQNSANGISEISSK 639

Query: 464 LGEILARYR 472
           L  I+ R++
Sbjct: 640 LSGIVGRFK 648