Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  321 bits (822), Expect = 4e-92
 Identities = 184/480 (38%), Positives = 280/480 (58%), Gaps = 8/480 (1%)

Query: 1   MREVQFRTIDRVFIRMSINDKMWVIFLLFLSAITTIAGMRYWHTLASIEQQSQLAVEYKL 60
           M+++ FR ID + I+ S+N K W++  +  +    +A   Y   LA+IE  S   V   L
Sbjct: 1   MKQITFRKIDAILIKFSLNGKFWLVCSMVAAITAVVALANYRLQLATIESASDARVSAAL 60

Query: 61  QGLL-----NHPDPSQLSVLKVQNRVSDTIYS--QGVVTASATSANGQAYAYTESMKQYE 113
                    N      L     ++ +S +  S  +G    + T+ +G   A + ++  +E
Sbjct: 61  DAYAEIARDNDLQGDALRAFATRHGLSQSGQSGRKGNTVTAVTNLDGSLLALSRNVADWE 120

Query: 114 QPAREQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHPG 173
             +R  A        L  +P    +YW++T +GG LW +Y   +++A+GDLT RL F  G
Sbjct: 121 SESRSDASMMLWWAALGLLPLFQLSYWMSTSLGGGLWDMYMAIKRLADGDLTQRLNFF-G 179

Query: 174 RDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSV 233
            D+F  I   +D+  D +++++ A++ N+ TL+  +  F+++ + S+   + Q+  LDSV
Sbjct: 180 TDDFSLIAREIDRCADNMSDMLSAIRNNADTLKRASSAFSNQAQSSDSLARRQHEFLDSV 239

Query: 234 ATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSV 293
           A AM +MT++  EVS  +   + QT  +   V+ SQ+R+   +  I +LS  I  ASSSV
Sbjct: 240 AVAMSQMTSAIEEVSANASATSTQTRSNAGAVKESQKRITNTVSGIAELSGKIGDASSSV 299

Query: 294 ETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQ 353
           + L+  AT+I+AV+T I++ISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA RTQ
Sbjct: 300 DALSREATEISAVVTVIDSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQ 359

Query: 354 SATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSV 413
            ATVEIQ+MIE LQ  S+ ++ +T   VS+A      VS VG DV  IA S   + D++ 
Sbjct: 360 QATVEIQSMIESLQSGSKALSGITGDIVSRAEQGKSAVSLVGEDVGNIADSINQVFDMAS 419

Query: 414 QISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYRT 473
            I+ SA EQS    +I+++L++IR+QS  +   A    +   E+ QA+  L +IL +YRT
Sbjct: 420 HIAASAEEQSVACREIAAQLAEIRNQSGVISDNAHNALELAHELAQASVALTDILGQYRT 479