Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  181 bits (459), Expect = 5e-50
 Identities = 108/312 (34%), Positives = 178/312 (57%), Gaps = 1/312 (0%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           +GDLT RL     +DE G +  A +  ++ +   +  V++ +A L + A T       + 
Sbjct: 184 DGDLTRRLPVE-SQDEIGRLASAFNAFIEQIHATVTKVQETAAQLIEGAGTLGSLSGANN 242

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
           +++Q Q    ++  TA+ +++ASAAEV+  + R +E   +   QV+ SQ+R  +++    
Sbjct: 243 LRVQEQRQETEAAVTAVSQLSASAAEVAGNALRTSEAAAEADAQVDESQRRFDQSLGLTR 302

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
           QL   +++ + SV+ L     +I+ V+  IN+I+EQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 303 QLVDELSRCAISVQQLQQETQKIDEVVVVINSIAEQTNLLALNAAIEAARAGEQGRGFAV 362

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQA 400
           VADEVRTLASRTQ AT EIQ MI+++Q    +   +   +   +  S     E+ + + +
Sbjct: 363 VADEVRTLASRTQQATGEIQKMIQQVQTRVNDTVTVMGASQQLSDKSLSQAEEIKSMLAS 422

Query: 401 IAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQA 460
           +      IN ++ +++ +ASEQ+SV  +IS  L+D+   S +    +   +Q    + Q 
Sbjct: 423 VTRLVSNINAMNTEVAHAASEQTSVTENISRSLNDLAGISGSASADSASLAQSGERLFQQ 482

Query: 461 TRNLGEILARYR 472
              L  ++  +R
Sbjct: 483 GERLRALVNSFR 494