Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  577 bits (1487), Expect = e-169
 Identities = 308/477 (64%), Positives = 375/477 (78%), Gaps = 4/477 (0%)

Query: 1   MREVQFRTIDRVFIRMSINDKMWVIFLLFLSAITTIAGMRYWHTLASIEQQSQLAVEYKL 60
           M++V FRTID++FIRMSINDKMWV+FLLF+ A+ T AG+RY  ++ +IE  S  A E +L
Sbjct: 1   MKQVDFRTIDKIFIRMSINDKMWVVFLLFVLALGTTAGLRYSQSVDAIEASSLKAAEARL 60

Query: 61  QGLLNHPDPS----QLSVLKVQNRVSDTIYSQGVVTASATSANGQAYAYTESMKQYEQPA 116
            G+L+  + +    + + L +        +    VT SA +ANGQ+Y+  + ++  E  A
Sbjct: 61  AGMLDTLNATGQFEKAASLGLTTGRGKNRHDGDSVTVSAIAANGQSYSLEQDVRSQESKA 120

Query: 117 REQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHPGRDE 176
           R  A    L T LW +PF +F YWVATFIGGALWVLYTTT+KI  GDLTSRLGFHPGRDE
Sbjct: 121 RSAASAGLLWTGLWLLPFGLFLYWVATFIGGALWVLYTTTEKIGSGDLTSRLGFHPGRDE 180

Query: 177 FGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATA 236
           FGTIGCALDKAMDTL EL+  VK N+ TL DT+ +F  E+K+S  QI  QY SLDSVATA
Sbjct: 181 FGTIGCALDKAMDTLTELVKVVKANADTLSDTSESFEREMKQSLQQINRQYVSLDSVATA 240

Query: 237 MEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETL 296
           MEEMTASA EVS  S++ATE+TEQD  QVE S QRV+KAI DIEQLS  I QASSSV TL
Sbjct: 241 MEEMTASAQEVSNISRQATEKTEQDATQVESSFQRVQKAISDIEQLSGLIEQASSSVATL 300

Query: 297 NTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSAT 356
           N N TQIN VITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQ+AT
Sbjct: 301 NVNTTQINEVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQAAT 360

Query: 357 VEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQIS 416
           VEIQAMIEKLQ ES+NIA +TE+TVSQA +SS +++ +G DV+ IA S++ I D+S+QIS
Sbjct: 361 VEIQAMIEKLQGESRNIANITEKTVSQAQSSSGVIANIGADVRGIADSSRAITDMSIQIS 420

Query: 417 TSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYRT 473
           TSA EQSSVA+ I++ELSDIR+QSNT+R VAEQ+S+GV+ + +A+R+LG++LARYRT
Sbjct: 421 TSAEEQSSVANSIAAELSDIRNQSNTIRTVAEQSSEGVARLAEASRSLGKVLARYRT 477