Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  190 bits (482), Expect = 1e-52
 Identities = 120/351 (34%), Positives = 192/351 (54%), Gaps = 8/351 (2%)

Query: 123 SFLLTYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHPGRDEFGTIGC 182
           +F+LT + A+   +FT  + + I  +L +     + IA GDLT  L    G DE   +  
Sbjct: 199 AFILTIVLAV---LFTNSIVSPISSSLKL----AEDIAAGDLTHDLEV-TGSDEASRLMH 250

Query: 183 ALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTA 242
           AL+     L   I+ +   S+ L   A+      + ++  +Q Q S ++  ATA+ EM+A
Sbjct: 251 ALNLMQKNLRHTILEISGASSQLSTAAVEMTSITESADRTLQQQNSEIEQAATAVTEMSA 310

Query: 243 SAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQ 302
           +  EV+  +   +E   Q +   +   Q+V + +  +  L+  +  +S  V+ L   A  
Sbjct: 311 AVEEVARNANSTSEAAMQSSIAADLGNQKVTETLTAMRGLTGLVEVSSDQVKELAAQAQD 370

Query: 303 INAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAM 362
           I+ V++ I AI+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RTQ++T EI+ M
Sbjct: 371 ISKVLSVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQTSTQEIEQM 430

Query: 363 IEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQ 422
           I  +Q  S    +  +++ S+ +++       G  ++ I  S   IND ++QI+T++ EQ
Sbjct: 431 ISTIQTGSSAAVESMQKSTSEVYSTRDTAEHAGQSLRQIIDSVLEINDRNIQIATASEEQ 490

Query: 423 SSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYRT 473
           + VA D+   L  IR  +        QT    +E+++   NL +++ R+RT
Sbjct: 491 AHVARDVDRSLISIRDLAVQSSEGTRQTLTASNELSRLAVNLNDLVLRFRT 541