Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (487), Expect = 3e-53
 Identities = 112/312 (35%), Positives = 179/312 (57%), Gaps = 1/312 (0%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           EGDLT RL    G DE   +G A ++ +D L  +I  V + +  ++  A   + +     
Sbjct: 243 EGDLTKRLDVQ-GSDEIAMLGRAFNQFVDKLQGIIKDVARATVEVKSGADNISSQTAAMA 301

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
            Q+ +  +  D V TA+ EM+A+A+EV+ ++ +  E T+  T+ V  +Q+ V  ++ ++ 
Sbjct: 302 QQLISHNNETDQVVTAITEMSATASEVAMSTTQVAEATQAATQDVGNAQECVDSSLHEVS 361

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
            L   I  A+  + +LN  + +IN+V++ I  I+EQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 362 TLMAEIDMAAGHINSLNEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAV 421

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQA 400
           VADEVR+LASRTQ++T+EI  M+ +L           E +    H S      + + + A
Sbjct: 422 VADEVRSLASRTQASTLEINEMLSELHNLVSLAVSSMESSQQSCHRSVTSSRAISDSLGA 481

Query: 401 IAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQA 460
           +  +   IND+S QI+T+A+EQSSV  +I+  +  I+   N L + +   S     +   
Sbjct: 482 VTSAVTSINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLQASNSASDTSQGLANE 541

Query: 461 TRNLGEILARYR 472
            RNL  ++ +++
Sbjct: 542 GRNLDTLVGQFK 553