Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  198 bits (504), Expect = 4e-55
 Identities = 112/312 (35%), Positives = 187/312 (59%), Gaps = 1/312 (0%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           EGDL+ RL     +DE G++  + ++ +  L++ + +V   +  L        ++ K  E
Sbjct: 329 EGDLSLRLD-DSRQDETGSMAASYNQFVTYLSKTLQSVSATANDLFQAVERIDNQAKHME 387

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
            +I +Q S ++ VATA+ EM  +A E+++++  A E  +   + V +  Q V+  I  + 
Sbjct: 388 HEINDQVSKIEQVATAIHEMGMTAQEIASSANNAAENAQVADQSVNQGNQSVQNTIASVA 447

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
            +S  +   S +V  L  +A+ I+ V+  I  +SEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 448 SMSEQLLTTSETVSQLAEDASSIDTVLEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAV 507

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQA 400
           VADEVRTLASR+ ++T +I+ +IEKLQ ++  +     Q+ +Q+  S Q  S  G  + +
Sbjct: 508 VADEVRTLASRSHASTEDIRHIIEKLQAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHS 567

Query: 401 IAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQA 460
           IA + Q ++++S+QI+T+  EQS+V  +I+  ++ I   S +   V  QTS   S++ + 
Sbjct: 568 IAENIQAMSEMSMQIATATEEQSNVVGEINPHVTAIADISRSSSDVVRQTSLDCSDLREM 627

Query: 461 TRNLGEILARYR 472
              L E+++R++
Sbjct: 628 AVQLNELVSRFK 639