Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  179 bits (454), Expect = 2e-49
 Identities = 118/364 (32%), Positives = 185/364 (50%), Gaps = 16/364 (4%)

Query: 118 EQALRSFLLTYLWAIPFAIFTYWVATFIGGALWVLY---------TTTQKIAEGDLTSRL 168
           +QAL S L++       AI      + + G L++LY          T      GDLT RL
Sbjct: 274 DQALTSALVSS------AIMLLCAISILLGVLYLLYRPILSLKAMVTELSKGNGDLTKRL 327

Query: 169 GFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYS 228
             H   D+ G I   +++ +  L  ++  V Q SA +  +      E + +   +     
Sbjct: 328 EIHC-EDDLGQISMGINQFIANLQAMMREVLQASAHISGSVERLNGETETNRHILSAHTK 386

Query: 229 SLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQ 288
             + +  A+EEM+A+A +V+         T+   +Q   S+Q V +A + + +L R +  
Sbjct: 387 ETEQIVAAVEEMSATANDVAQNGSETASFTQLTNEQALASKQVVAQATETVNRLVREVEH 446

Query: 289 ASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTL 348
            +  +  ++ +   I  V+  I  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR L
Sbjct: 447 TADKIGQIDRDTINITQVLKVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL 506

Query: 349 ASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLI 408
           A+RTQ +T EI+  +  L+  S +     E T      ++     V  D+ AI  S   I
Sbjct: 507 AARTQDSTAEIEETLSNLRDASNSAIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQI 566

Query: 409 NDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEIL 468
           NDL+ QI+T+A EQSSV+ +I+  +S I   +N L R  E +      +  A + L +I+
Sbjct: 567 NDLNTQIATAAEEQSSVSAEITRNMSAICDMANELARSGESSRNETVNLATANQQLEQIV 626

Query: 469 ARYR 472
            +++
Sbjct: 627 GQFK 630