Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (474), Expect = 1e-51
 Identities = 132/429 (30%), Positives = 217/429 (50%), Gaps = 30/429 (6%)

Query: 66  HPDPSQLSVLKVQN----RVSDTIYSQGVVTASATSANGQ----AYAYTESMKQYEQPAR 117
           H D SQ+    + +     V+  + ++G    + T  +G+    A +Y  SM  Y   A+
Sbjct: 212 HSDTSQIGKASLSSLYGGNVTRELLNKGDFGLTQTELDGETLLVASSYIPSMDWY-LVAQ 270

Query: 118 EQALRSFLLTYLWAIPFAIFTYWVAT-FIGGALWVLYTTTQKIA------------EGDL 164
                 F L    A    ++T  +A  FIG + +V  + +Q IA            EGDL
Sbjct: 271 VPRAEVFALLEESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDL 330

Query: 165 TSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQ 224
             RL    G DE   +    +  ++ +   I+ V   S  L   A   A++ ++++   Q
Sbjct: 331 RQRLPVE-GNDELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQ 389

Query: 225 NQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSR 284
            Q      V TA+ EM A+  E++  + +A +  +         Q  V +A   I QLS+
Sbjct: 390 LQKDQTMMVVTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQ 449

Query: 285 YIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADE 344
            + Q  + +E+L T+ T I +++  I A+S+QTNLLALNAAIEAARAGE GRGFAVVA+E
Sbjct: 450 DVEQVGNVIESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEE 509

Query: 345 VRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHS 404
           VR LASRT ++T E+Q MI+ LQ E+    +   Q+ S++    Q V E  + +  I+  
Sbjct: 510 VRNLASRTAASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQ 569

Query: 405 AQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNL 464
              I D+++Q++ +  EQS+V  DI+  +++I         + ++TS+    + QA+++L
Sbjct: 570 IGAITDMNIQVAAATEEQSTVVEDINRNVTEI-------SEITQRTSETSQAVAQASQSL 622

Query: 465 GEILARYRT 473
            ++  R  T
Sbjct: 623 NQLAHRLDT 631