Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  197 bits (501), Expect = 9e-55
 Identities = 117/314 (37%), Positives = 187/314 (59%), Gaps = 5/314 (1%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           EGDLT R+     +DE   +  A ++  + +   +  V  +++ L  +A   +    E++
Sbjct: 323 EGDLTRRIEVK-SKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQ 381

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
                Q+   + VATAM EM A+  EV+  +  A +     ++  E+ +  V K I  I 
Sbjct: 382 QMANRQHLETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTIS 441

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
            L+  IAQA++++  L  N TQI++V+  I  I++QTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 442 LLADEIAQAANAINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAV 501

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSS--QLVSEVGNDV 398
           VADEVRTLASRTQ++T EIQ MIE LQ  ++  A ++    S A T S   LV E G+ +
Sbjct: 502 VADEVRTLASRTQASTTEIQQMIETLQQSAK--ATVSSMNTSTATTQSCVSLVHEAGSAL 559

Query: 399 QAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEIT 458
           +AI  +   I+ +++QI+++A+EQ +V+ +I+  +++I   +      A QT++   E+ 
Sbjct: 560 EAITQAVSTISQMNIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELA 619

Query: 459 QATRNLGEILARYR 472
           Q +  L  +L++++
Sbjct: 620 QLSMRLTTLLSQFK 633