Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  195 bits (495), Expect = 4e-54
 Identities = 115/312 (36%), Positives = 182/312 (58%), Gaps = 1/312 (0%)

Query: 161 EGDLTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTFAHEVKESE 220
           EGDLT RL    G DE   +G + +  +D L  +I  V   +A ++  A     + K   
Sbjct: 243 EGDLTKRLAVK-GDDEIAQLGRSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVMS 301

Query: 221 VQIQNQYSSLDSVATAMEEMTASAAEVSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIE 280
            Q+ +  +  D V TA+ EM+A+A+EV+  + +  E T   T  V  +Q+ V  ++++I 
Sbjct: 302 RQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEIS 361

Query: 281 QLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARAGEQGRGFAV 340
            L   I  A+S++++L+  + +IN+V++ I  I+EQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 362 ALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAV 421

Query: 341 VADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQA 400
           VADEVR LASRTQS+T+EI  M+ +L        K  E++      S      +   + +
Sbjct: 422 VADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLGS 481

Query: 401 IAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTSQGVSEITQA 460
           +  +   IND+S QI+T+A+EQSSV  +I+  +  I+   N L   +E+ +     ++Q 
Sbjct: 482 VTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQE 541

Query: 461 TRNLGEILARYR 472
             NLG+++ +++
Sbjct: 542 GLNLGKLVGQFK 553