Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  188 bits (478), Expect = 3e-52
 Identities = 115/346 (33%), Positives = 188/346 (54%), Gaps = 1/346 (0%)

Query: 127 TYLWAIPFAIFTYWVATFIGGALWVLYTTTQKIAEGDLTSRLGFHPGRDEFGTIGCALDK 186
           T +  +  A   Y ++  I   L  +    Q IA G+LT +L    G+DE   +   +++
Sbjct: 188 TLILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAV-TGKDELAALAHNINQ 246

Query: 187 AMDTLAELIVAVKQNSATLRDTAMTFAHEVKESEVQIQNQYSSLDSVATAMEEMTASAAE 246
           +M ++   +     ++  +   A   A   +E+   + NQ   L  +ATAM EM+A+ A+
Sbjct: 247 SMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIAD 306

Query: 247 VSTTSQRATEQTEQDTKQVERSQQRVRKAIQDIEQLSRYIAQASSSVETLNTNATQINAV 306
           V+  ++   + T++ T++     + V  ++  I  L++ + QA+  V  L     QI+ V
Sbjct: 307 VANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEV 366

Query: 307 ITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKL 366
              I+AIS+QTNLLALNAAIEAARAGEQGRGFAVVADEVR LASRT+ +T EIQ  I  L
Sbjct: 367 TAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQNTISLL 426

Query: 367 QVESQNIAKLTEQTVSQAHTSSQLVSEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVA 426
           Q  + + A   + +   A  S    ++ GND+  I    + ++D++ QI+T+A EQS+VA
Sbjct: 427 QQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAEEQSAVA 486

Query: 427 HDISSELSDIRSQSNTLRRVAEQTSQGVSEITQATRNLGEILARYR 472
            +++  +  I S +  +   A   +Q    + + + NL   LA ++
Sbjct: 487 EEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFK 532