Pairwise Alignments

Query, 473 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  183 bits (464), Expect = 1e-50
 Identities = 123/381 (32%), Positives = 208/381 (54%), Gaps = 9/381 (2%)

Query: 99  NGQAYAYTESMKQYEQPAREQALR----SFLLTYLWAIPFAIFTYWVATFIGGALWVLYT 154
           N    A    +K+ +  A EQA      S  +  L AI   +  Y+    I  A+  +  
Sbjct: 163 NAAGEAADNRVKELDLQASEQATTQTQISVTIATLVAIVALVIAYFGPKIIVNAIRDITD 222

Query: 155 TTQKIAEGD--LTSRLGFHPGRDEFGTIGCALDKAMDTLAELIVAVKQNSATLRDTAMTF 212
               I +GD  LT R+     +DE G +  A +  +  L ++++A+   +  +  T    
Sbjct: 223 RINDIVDGDGNLTQRIPI-TRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENL 281

Query: 213 AHEVKESEVQIQNQYSSLDSVATAMEEMTASAAEVSTTS-QRATEQTEQDTKQVERSQQR 271
           A +   +      Q   +D++ TA+ EM+A+  EV++ +   ATE T+ + + +E  +  
Sbjct: 282 ATKSTTTIGISYEQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIE-GKNI 340

Query: 272 VRKAIQDIEQLSRYIAQASSSVETLNTNATQINAVITTINAISEQTNLLALNAAIEAARA 331
           + +++  I+QLS  + QA + +E L+ N+  I +V+  I +I+EQTNLLALNAAIEAARA
Sbjct: 341 LTQSVNHIQQLSESVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARA 400

Query: 332 GEQGRGFAVVADEVRTLASRTQSATVEIQAMIEKLQVESQNIAKLTEQTVSQAHTSSQLV 391
           GEQGRGFAVVADEVRTLASRT+++T +IQ MIE+LQ    +  K  E   S  +++  L 
Sbjct: 401 GEQGRGFAVVADEVRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLA 460

Query: 392 SEVGNDVQAIAHSAQLINDLSVQISTSASEQSSVAHDISSELSDIRSQSNTLRRVAEQTS 451
           S+  + +  I +S   ++++S Q +T+  EQ+ V  +I+  L+++  ++     V ++T 
Sbjct: 461 SQTQDALDEILNSTSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQ 520

Query: 452 QGVSEITQATRNLGEILARYR 472
           Q V        NL + ++R++
Sbjct: 521 QIVVNTQTICSNLQKEVSRFK 541