Pairwise Alignments

Query, 400 a.a., tyrosine transporter TyrP from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., tryptophan-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (645), Expect = 9e-72
 Identities = 137/402 (34%), Positives = 232/402 (57%), Gaps = 13/402 (3%)

Query: 6   LLGSTLIIAGTTIGAGMLALPLASAGIGFSTSLMIMLGLWMLMAFTALLMVEIHQYADKE 65
           LLG  +IIAGTT+GAGM +LP+  +G+ F  S++++LG+W  M  + LL++E + + +  
Sbjct: 13  LLGGAMIIAGTTVGAGMFSLPVVGSGMWFGYSILMLLGIWFCMLMSGLLLLETNLHFEPG 72

Query: 66  ATLHTLAKQILGDKGKWVATFAMLFLFYSLCAAYIAGGGAQFTQRITDFTGVNVESSSGT 125
           A+  TL K+ LG   + V   ++ F+ Y L  AYI+GGG+     +    G+ +  S   
Sbjct: 73  ASFDTLTKETLGQFWRIVNGVSIAFVLYILTYAYISGGGSIVNHSLQGM-GIELPQSVAG 131

Query: 126 LLFTLIVALVVTVGTGTVDRVNRVLFAGKMIAMVAVLFFLAPNVSQSYLLSMPIQQGLIV 185
           L+FT+++A +V + T  VDR+  ++  G +I     +  L   +  + LL     Q  I 
Sbjct: 132 LVFTVVLACIVLISTKAVDRITTIMLGGMIITFFLAIGNLLIEIDVTKLLEPDGNQRFIP 191

Query: 186 ---AAIPVIFTSFGFHGSIPAIVNYLDGDTPALRKAILIGSAIPLVIYIFWQLVTLGVVS 242
               A+P    SFG+HG++P++V Y   D+  + KAI +G+ I L+IY+ W + T+G + 
Sbjct: 192 YLWVALPFGLASFGYHGNVPSLVKYYGKDSSTIIKAIFVGTFIALIIYVCWLVATMGNIP 251

Query: 243 QSALLD------NMGLTALIGVLSTTVHQSNLGNIIGVFADLALLTSFLGVSLGLFEFMG 296
           +S   +      NMG+  L+G LS  +  S L +++ +FA+LA+ +SFLGV+LGLF+++ 
Sbjct: 252 RSQFSEIIAQGGNMGV--LVGALSKVMESSWLNSMLTLFANLAVASSFLGVTLGLFDYLA 309

Query: 297 DSLRNQQGKMNRPLASVVTFLPPLIFALFYPQGFIMALGYAAIALAILAIFLPLVMVIKV 356
           D       +  R   ++VTF+PP +F L +P GF++A+G+AA+A  + A+ +P +M  K 
Sbjct: 310 DLFGFDDSRSGRMKTAIVTFVPPTVFGLLFPDGFLIAIGFAALAATVWAVIVPALMAYKS 369

Query: 357 RQQ-ATEQHYQVTGGNGALLVTGLVGLLIIGAQLLITLGILP 397
           RQ     Q ++V GG   +++  L G++     LL    +LP
Sbjct: 370 RQLFPNHQGFRVFGGTPLIILVVLFGVVTGACHLLAMANLLP 411