Pairwise Alignments

Query, 400 a.a., tyrosine transporter TyrP from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., tyrosine-specific transport protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  429 bits (1104), Expect = e-125
 Identities = 223/394 (56%), Positives = 292/394 (74%), Gaps = 4/394 (1%)

Query: 1   MTQSKLLGSTLIIAGTTIGAGMLALPLASAGIGFSTSLMIMLGLWMLMAFTALLMVEIHQ 60
           MTQ+K  GS L+IAGTTIGAGMLALP+ASAG+GF  S MIML  W LMA+TALLMVEIHQ
Sbjct: 1   MTQNKFFGSLLLIAGTTIGAGMLALPIASAGLGFGMSSMIMLIFWALMAYTALLMVEIHQ 60

Query: 61  YADKEATLHTLAKQILGDKGKWVATFAMLFLFYSLCAAYIAGGGAQFTQRITDFTGVNVE 120
           +A  +A+L+ LA+ +LG KG+ VA  A++FL Y+LCAAYIAGGG Q  Q++T + G+ + 
Sbjct: 61  FAPSDASLNQLARHLLGTKGQVVACIALMFLLYALCAAYIAGGGEQVHQKLTSWLGLALP 120

Query: 121 SSSGTLLFTLIVALVVTVGTGTVDRVNRVLFAGKMIAMVAVLFFLAPNVSQSYLLSMPIQ 180
             +G +LFTL++  +V +GT  VD +NRVLF+ K+IA++ +L  L P V  ++LL +P++
Sbjct: 121 PQAGAILFTLLIGTIVGLGTHCVDLINRVLFSLKIIALILMLALLLPQVEGTHLLELPLE 180

Query: 181 QGLIVAAIPVIFTSFGFHGSIPAIVNYLDGDTPALRKAILIGSAIPLVIYIFWQLVTLGV 240
           QGLIV+AIPVIFTSFGFHGSIP++V YL  +  ALRK +L+GSA+PL+IY+ WQL + GV
Sbjct: 181 QGLIVSAIPVIFTSFGFHGSIPSVVRYLGIEVKALRKIMLLGSALPLLIYLLWQLGSQGV 240

Query: 241 VSQSALLDNMGLTALIGVLSTTVHQSNLGNIIGVFADLALLTSFLGVSLGLFEFMGDSLR 300
           +SQS L+ N  L+  I  L++ +H   L + I VFADLAL TSFLGVSLGLF+F+  +LR
Sbjct: 241 LSQSQLMTNQSLSGFISQLASVLHSQYLSSAISVFADLALATSFLGVSLGLFDFIAANLR 300

Query: 301 NQQGKMNRPLASVVTFLPPLIFALFYPQGFIMALGYAAIALAILAIFLPLVMVIKVRQQA 360
            +     R + + +TF+PPL FALFYPQGFI ALGYAAIAL ILAIFLP+ MV   R+Q 
Sbjct: 301 QEDNATGRSVTAAITFVPPLGFALFYPQGFITALGYAAIALVILAIFLPVSMVWVQRKQR 360

Query: 361 TE----QHYQVTGGNGALLVTGLVGLLIIGAQLL 390
            +    Q Y+V GG   L++  L GL +I AQLL
Sbjct: 361 DKAKLPQGYRVAGGTLGLVLALLCGLAVISAQLL 394