Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score =  303 bits (775), Expect = 1e-86
 Identities = 168/369 (45%), Positives = 237/369 (64%), Gaps = 3/369 (0%)

Query: 7   TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
           TF +LGL   ++ TLS  G   PTPIQ QAIP VL+  D++  AQTGTGKTAAFGLP+I+
Sbjct: 3   TFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIE 62

Query: 67  RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
           + +     R  + + IRALVL PTREL  Q+  +L+ + K + LKI  V GG S+  Q  
Sbjct: 63  KLVADG--RRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTE 120

Query: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPL 186
            L  GVDIL+ATPGRLLD    K++ L +   LVLDEAD+MLD+GF+ DL+++ + +   
Sbjct: 121 QLARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKN 180

Query: 187 RQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPV-DKKRKRELLSYL 245
           RQTL FSAT    I  +A   + DP++V+V+P    A+ V+Q V+ V  K  K  +L   
Sbjct: 181 RQTLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT 240

Query: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305
           + +      L+F++T+ G++ L + L   G KA SI+G+KSQG R++AL  F+ G++R L
Sbjct: 241 LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL 300

Query: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365
           +ATDVAARG+DI  +  V NYD+P   + YVHRIGRT R G  G+A++  + DE   L  
Sbjct: 301 VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRD 360

Query: 366 IERLLNTRL 374
           IE+L+  ++
Sbjct: 361 IEKLMGIQI 369