Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  381 bits (978), Expect = e-110
 Identities = 196/378 (51%), Positives = 265/378 (70%), Gaps = 2/378 (0%)

Query: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
           F        +L  L+E G    TPIQ+ AIP V +G+DVLA AQTGTGKTAAF LP++Q+
Sbjct: 3   FESYSFAPEILQALAECGYETMTPIQRLAIPPVRRGQDVLASAQTGTGKTAAFALPILQK 62

Query: 68  FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
            ++ P  REA   + RAL+L PTREL +Q+ ++++AYAK  EL +  V+GG    VQ   
Sbjct: 63  LLDTPKAREAT--KARALILAPTRELTEQIANNIKAYAKHLELAVTTVFGGGKTDVQAQK 120

Query: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
           LR G DI++ATPGRLL+H    +L L  VE LVLDEADRMLDMGF+ D+Q++++  +  R
Sbjct: 121 LRKGTDIIVATPGRLLEHLLAGNLSLAAVEFLVLDEADRMLDMGFIADIQKLIQACNKER 180

Query: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLIG 247
           QTL FSATF   ++ +A  IM+    +     N+ A TV Q+VYPV+++RKRELLS LIG
Sbjct: 181 QTLMFSATFSGGVRKLADEIMKKHTVLTADRHNTAATTVSQVVYPVEQRRKRELLSELIG 240

Query: 248 SKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIA 307
            KNWQ+VLVF+ TR+  + L EEL LDGI +  I+ +K+QG R++AL DF  GK+R L++
Sbjct: 241 RKNWQRVLVFSATREDCEKLTEELNLDGIPSAVIHSEKAQGTRRRALKDFTEGKIRVLVS 300

Query: 308 TDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIE 367
           T+VAARGLDI  LE VVN+D+PF  EDYVHR+GRTGRAG +G+A+S +S +E+  L  IE
Sbjct: 301 TEVAARGLDIPDLEYVVNFDLPFLPEDYVHRVGRTGRAGKSGVAISFVSREEERTLADIE 360

Query: 368 RLLNTRLPQEWLKGFEPS 385
           +L+  RL +  + G+E S
Sbjct: 361 KLIGQRLKRIVMPGYEVS 378