Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  305 bits (781), Expect = 3e-87
 Identities = 163/372 (43%), Positives = 232/372 (62%), Gaps = 4/372 (1%)

Query: 6   ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
           +TF+ LGL    L  + E+G   PTPIQ QAIP+V  G+DVL  AQTGTGKTA+F LP+I
Sbjct: 1   MTFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMI 60

Query: 66  QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125
                     +A ++  R+L+L PTRELA QV ++   Y K  +L +  + GG SM  Q 
Sbjct: 61  DILASG----KAKARMPRSLILAPTRELATQVSENFTLYGKYQKLSMALLIGGESMNEQQ 116

Query: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185
             L  GVD+LIATPGRL+D     S+ L  V+VLV+DEADRMLDMGF+PD++R++  L  
Sbjct: 117 KVLDRGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPK 176

Query: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYL 245
           +RQTLFFSAT D +I+ +A   + +P EV++ P+   AETV+Q +  V    KRE L  L
Sbjct: 177 IRQTLFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQL 236

Query: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305
           +  +      +F   ++  D L + L   G   ++++GD  Q  R + L+ FK  +V+ +
Sbjct: 237 LRRETVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLM 296

Query: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365
           + +DVAARG+D+ ++  V N+D+P   EDY+HRIGRTGRAG  G A +L + ++   L A
Sbjct: 297 VCSDVAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRA 356

Query: 366 IERLLNTRLPQE 377
           IE LL   +P +
Sbjct: 357 IENLLGKTIPPD 368