Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  311 bits (797), Expect = 2e-89
 Identities = 173/388 (44%), Positives = 252/388 (64%), Gaps = 4/388 (1%)

Query: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
           F+ L L   L   ++ LG    TPIQ  AIP  L G+DVL  AQTGTGKTA+F LPL+QR
Sbjct: 4   FASLDLIEPLARAVTALGYTVATPIQAGAIPPQLLGRDVLGIAQTGTGKTASFVLPLLQR 63

Query: 68  FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKG-TELKIVAVYGGTSMKVQLN 126
             + P  R       RAL+L PTRELAQQ+ +S+    +  + ++   V GG  +  Q  
Sbjct: 64  LTKDPQPRVPGRP--RALILTPTRELAQQITESIGDLGRTLSAIRCGVVVGGVDILRQTR 121

Query: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPL 186
            ++ G++IL+ATPGRL D  + K++ L  +EVLVLDEADRMLDMGF P ++++   L   
Sbjct: 122 MVQRGLEILVATPGRLQDLMNRKAVDLRAIEVLVLDEADRMLDMGFAPAVKKIAAVLPRK 181

Query: 187 RQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLI 246
           RQT+ FSAT  +++  +   +M DP+ V+V P+ S A  + Q V  V++  KR+LL  L+
Sbjct: 182 RQTVMFSATLPNEVTGLVASLMNDPVRVEVAPAASVANRIDQRVLFVEQTNKRKLLLDLL 241

Query: 247 G-SKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305
           G ++  ++ +VFT+T+ G++ L   L   G+K+  I+G+KSQGARQ+AL+DFK+GKVRAL
Sbjct: 242 GDARKVERAIVFTRTKHGANKLGIFLLEYGVKSDVIHGNKSQGARQRALNDFKSGKVRAL 301

Query: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365
           +ATD+AARG+D+  +  V+N+D+P + E YVHRIGRT RAG AG+A+SL +  E P L+A
Sbjct: 302 VATDIAARGIDVDGITHVINFDLPNEPESYVHRIGRTARAGAAGIALSLCAPQEMPYLKA 361

Query: 366 IERLLNTRLPQEWLKGFEPSPVVHEENS 393
           IE+++ +R+  +    F    +     S
Sbjct: 362 IEKVIKSRIDVDSTHAFHTPSMARAHGS 389