Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  388 bits (997), Expect = e-112
 Identities = 194/376 (51%), Positives = 269/376 (71%), Gaps = 2/376 (0%)

Query: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
           F        +L+ +SE G    TPIQ++AIP + +G+DVLA AQTGTGKTAAF LP++Q+
Sbjct: 3   FESFSFAPEILHAISECGYQKMTPIQKEAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62

Query: 68  FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
             + P   +      RAL+L PTREL  QV D+++ Y++   + ++ VYGG  M  Q   
Sbjct: 63  MFDSP--SDTQRSNTRALILAPTRELVAQVADNIKQYSRYLPISVLTVYGGVKMDTQAAK 120

Query: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
           ++ G DI++ATPGRLL+H    +L L  V+ LVLDEADRMLDMGF+ D+Q++L++++  R
Sbjct: 121 VKKGADIIVATPGRLLEHLQACNLNLSNVDFLVLDEADRMLDMGFITDIQKILQQVNRDR 180

Query: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLIG 247
           Q L FSATF S +K +A  ++  P  + V   N+TA TV Q+VYPV+++RKRELLS LIG
Sbjct: 181 QNLLFSATFSSAVKQLANEMLVKPKLIAVDKQNTTAVTVSQVVYPVEQRRKRELLSELIG 240

Query: 248 SKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIA 307
            KNWQQVLVFT TR+ +D L +EL LDGI +  ++ +K+QG R++AL +FK GKVRAL+A
Sbjct: 241 KKNWQQVLVFTATREAADVLVKELNLDGIPSAVVHSEKAQGNRRRALREFKEGKVRALVA 300

Query: 308 TDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIE 367
           T+VAARGLDI +LE VVN+D+PF AEDYVHRIGRTGRAG  G+A+SL+S +E+  L  IE
Sbjct: 301 TEVAARGLDIPELEYVVNFDLPFLAEDYVHRIGRTGRAGRTGVAISLVSREEERTLADIE 360

Query: 368 RLLNTRLPQEWLKGFE 383
           +L+  ++ +  + G+E
Sbjct: 361 KLIGNKIRRITIPGYE 376