Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  362 bits (928), Expect = e-104
 Identities = 194/378 (51%), Positives = 259/378 (68%), Gaps = 1/378 (0%)

Query: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
           F +LGL   +L  ++E+G A  TPIQQQAIP VLQGKD+ A AQTGTGKTAAF LPLIQR
Sbjct: 3   FDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLIQR 62

Query: 68  FIEQPWQREANSKE-IRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
            +       + +K  +RAL+L PTRELA QV +S+++Y K T  + + ++GG  +K Q+ 
Sbjct: 63  LLHLDTASPSPAKHPVRALMLAPTRELALQVYESVKSYTKYTHFRSICLFGGVDIKPQIA 122

Query: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPL 186
            ++ GV+ ++ATPGRLLDH   KS+   +V+ LVLDEADRMLDMGF+PD+QR+L  L   
Sbjct: 123 EMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNMLPKT 182

Query: 187 RQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLI 246
           RQ+L FSATF ++I+ +A  +++ PI V+V   N   +T+   V+PV + RK++LL  L+
Sbjct: 183 RQSLLFSATFSNEIQRLADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLIKLL 242

Query: 247 GSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALI 306
            S    Q LVF +T+QG   LA EL+  GI A SI+GDKSQ  R KALD FK G  + L+
Sbjct: 243 RSGEITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCKVLV 302

Query: 307 ATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAI 366
           ATDVAARGLDI  L  V+N+++P   EDYVHRIGRTGRAG  G A+SL+   E   L  I
Sbjct: 303 ATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYLADI 362

Query: 367 ERLLNTRLPQEWLKGFEP 384
           E+L+  ++ Q  + GFEP
Sbjct: 363 EKLIKMQIEQVAVAGFEP 380