Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  380 bits (976), Expect = e-110
 Identities = 198/385 (51%), Positives = 274/385 (71%), Gaps = 9/385 (2%)

Query: 8   FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
           F+ LGL + +L  ++E G   PTPIQQQAIP VL G+D++A AQTGTGKTA F LP++Q 
Sbjct: 3   FTDLGLKAEILRAIAEQGYTEPTPIQQQAIPAVLAGRDLMACAQTGTGKTAGFTLPILQL 62

Query: 68  FI-----EQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
                  E P  R A  ++ R L+L PTRELA QV +S++ Y +   LK ++++GG  M 
Sbjct: 63  LSQAQAGESPLNRLA--RKPRVLILAPTRELALQVEESVRTYGQHLPLKSMSMFGGVGMN 120

Query: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
            Q+  L+ GVDIL+A PGRLLDH + ++L L  +E+LVLDEADRMLDMGF+ D++++L  
Sbjct: 121 PQIAALKRGVDILVACPGRLLDHINQRTLDLSGIEILVLDEADRMLDMGFIRDIRKILAL 180

Query: 183 LSP--LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRE 240
           L P   RQ L FSATF  +IK +A   + DP  ++V   N+T ETV Q V  VD+++K++
Sbjct: 181 LPPNGKRQNLLFSATFSDEIKELARSFLHDPQSIEVARRNTTVETVSQKVIHVDREKKKD 240

Query: 241 LLSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG 300
           +L +L  ++ W QVL+FT+T+ G+DAL+  L  +GI++ +++G+K+QGAR +AL +FK G
Sbjct: 241 VLLHLFENRGWNQVLIFTRTKHGADALSRRLDKEGIRSAALHGNKTQGARVRALTEFKEG 300

Query: 301 KVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQ 360
           K+ AL+ATD+AARG+DI QL  VVNY++P  AEDYVHRIGRTGRAG  G A+SL+ HDE+
Sbjct: 301 KLVALVATDIAARGIDIDQLPYVVNYELPNVAEDYVHRIGRTGRAGAEGEAISLVCHDER 360

Query: 361 PQLEAIERLLNTRLPQEWLKGFEPS 385
             L +IERL+   L +E L GFEPS
Sbjct: 361 DNLRSIERLIKKDLEKEVLPGFEPS 385