Pairwise Alignments

Query, 422 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  368 bits (945), Expect = e-106
 Identities = 209/406 (51%), Positives = 262/406 (64%), Gaps = 3/406 (0%)

Query: 6   ITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLI 65
           +TF+ L L   LL  L  LG   PTP+Q++AIP VL G D++A AQTGTGKTA+F LPL+
Sbjct: 1   MTFADLDLVPPLLEALDVLGYQTPTPVQEKAIPAVLAGGDLMAAAQTGTGKTASFALPLL 60

Query: 66  QRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQL 125
           QR    P    +NS   RAL+LVPTRELAQQV DS  AY +   L+  AVYGG S+  Q+
Sbjct: 61  QRLAHDPEPTASNST--RALILVPTRELAQQVCDSFVAYGQFLVLRSYAVYGGVSINPQM 118

Query: 126 NHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSP 185
             LR GVDIL+ATPGRLLD     ++   +V  LVLDEADRMLD+GF  +L  +   L  
Sbjct: 119 MKLRKGVDILVATPGRLLDLHRQNAVRFDQVRTLVLDEADRMLDLGFARELNALFALLPK 178

Query: 186 LRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYL 245
            RQTL FSATF   I+++A ++++ P+ ++    N+TA  ++Q V PVDKKRK  L  +L
Sbjct: 179 QRQTLLFSATFSDAIRSMADQLLKKPLSIETARPNATARGIKQWVVPVDKKRKSALFCHL 238

Query: 246 IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRAL 305
              K W QVLVF KTR+G D L E L   GI A SI+GDK Q AR +AL+ FKAG+VR L
Sbjct: 239 YKHKKWDQVLVFVKTRKGVDELVETLTAKGIAAESIHGDKPQPARLRALESFKAGQVRVL 298

Query: 306 IATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEA 365
           +ATDVA+RGLDI  L +VVN+D+P   EDYVHRIGRT RAG +G AVSL+  DE   L A
Sbjct: 299 VATDVASRGLDIDDLPRVVNFDLPIVPEDYVHRIGRTARAGASGEAVSLVCADEVNLLGA 358

Query: 366 IERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGRSSEKRKLKAQL 411
           IE L+   L +    GFEP   V  E  P     +  +K K+   L
Sbjct: 359 IEVLIGQPLSRIEQHGFEPDHRV-PETGPAGQVIKKPKKPKMPKHL 403