Pairwise Alignments

Query, 242 a.a., arginine ABC transporter ATP-binding protein ArtP from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  202 bits (513), Expect = 7e-57
 Identities = 110/243 (45%), Positives = 159/243 (65%), Gaps = 9/243 (3%)

Query: 3   IRVKGINKSYGTTQVLHDIHFECASGETLVLLGPSGAGKSSLLRVLNLLETADNGQLHIA 62
           I +  ++KS+G  QVL  I       E + L+GPSG+GKS+LLR +N LE  D G++ I 
Sbjct: 11  ITMDNVSKSFGALQVLKGITLAVNRSEVVCLIGPSGSGKSTLLRCINFLEPYDAGEVRIE 70

Query: 63  NQSFDFS-THPTEQQGLA----LRRKVGMVFQQYHLWPHMTVLENLVEAPVKVAGMAKSQ 117
            +   ++ + P  +Q       LRR VGMVFQ ++LWPHMT LEN+ EA V+V  M+ +Q
Sbjct: 71  GRLVGYTESFPRRRQSNRELRDLRRNVGMVFQHFNLWPHMTALENVREALVQVRKMSLAQ 130

Query: 118 AKQQAIEILKTLQLADKADAWPLQLSGGQQQRVAIARALMMKPDVLLFDEPTAALDPEIT 177
           A  +A E+L  + L+D+    P +LSGGQQQRVAIAR + M+P V+LFDEPT+ALDPE+ 
Sbjct: 131 ATARAEEVLTRVGLSDRMHVHPARLSGGQQQRVAIARVVAMEPHVMLFDEPTSALDPELV 190

Query: 178 NQVVKIIKELSGTGITQVVVTHEVDFAKKIASHVLYLEKGRIVEHGTHASFTH----PQT 233
            +V++++++L+  G+T VVVTHE+ FA  +A  V +L+ GRIV  G   +  H    P+ 
Sbjct: 191 GEVLQVMRDLATEGMTMVVVTHEMGFAANVADRVAFLDGGRIVACGPPRAVFHESPEPRL 250

Query: 234 QQF 236
           +QF
Sbjct: 251 RQF 253