Pairwise Alignments

Query, 242 a.a., arginine ABC transporter ATP-binding protein ArtP from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  204 bits (520), Expect = 1e-57
 Identities = 106/238 (44%), Positives = 159/238 (66%), Gaps = 8/238 (3%)

Query: 3   IRVKGINKSYGTTQVLHDIHFECASGETLVLLGPSGAGKSSLLRVLNLLETADNGQLHIA 62
           I++  ++K +G  QVL  I    A GE + ++GPSG+GKS+ LR +NLLE    G++ I 
Sbjct: 2   IKISNLHKYFGDNQVLKGIDESIARGEVVSVIGPSGSGKSTFLRCINLLEQPTQGEIVID 61

Query: 63  NQSFDFSTHPTEQQGLALRRKVGMVFQQYHLWPHMTVLENLVEAPVKVAGMAKSQAKQQA 122
            QS        ++    LR+KVGMVFQ ++L+PH TV +N+  APVK+  M +++A  +A
Sbjct: 62  GQSITAPDACIDK----LRQKVGMVFQNFNLFPHKTVQQNITLAPVKLGLMTQAEADSEA 117

Query: 123 IEILKTLQLADKADAWPLQLSGGQQQRVAIARALMMKPDVLLFDEPTAALDPEITNQVVK 182
           + +L  + L+DKA A+P  LSGGQ+QRVAIARAL MKP+++LFDEPT+ALDPE+   V+ 
Sbjct: 118 MRLLDQVGLSDKASAYPASLSGGQKQRVAIARALAMKPELMLFDEPTSALDPEMVGDVLD 177

Query: 183 IIKELSGTGITQVVVTHEVDFAKKIASHVLYLEKGRIVEHGTHASF----THPQTQQF 236
           ++K+L+  G+T V+VTHE+ FAK ++  V++++ G +VE    A        P+TQ F
Sbjct: 178 VMKQLAQAGMTMVIVTHEMGFAKDVSDRVIFMDGGYVVESNVPALLFGQPQEPRTQAF 235