Pairwise Alignments

Query, 242 a.a., arginine ABC transporter ATP-binding protein ArtP from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., amino acid ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  203 bits (516), Expect = 3e-57
 Identities = 104/239 (43%), Positives = 158/239 (66%), Gaps = 5/239 (2%)

Query: 3   IRVKGINKSYGTTQVLHDIHFECASGETLVLLGPSGAGKSSLLRVLNLLETADNGQLHIA 62
           I +  ++KSYG   VL  I+     GE + ++GPSG+GKS+ LR +NLLE    G + I 
Sbjct: 2   INITNLHKSYGDNAVLKGINEHIRQGEVVSVIGPSGSGKSTFLRCINLLENPTQGDIEIE 61

Query: 63  NQSFDFSTHPTEQQGLALRRKVGMVFQQYHLWPHMTVLENLVEAPVKVAGMAKSQAKQQA 122
            QS        ++    LR+KVGMVFQ ++L+PH TVL+N+  APV +  M +++A  +A
Sbjct: 62  GQSITAKDACVDK----LRQKVGMVFQNFNLFPHKTVLQNITLAPVSLKLMTQAEADNKA 117

Query: 123 IEILKTLQLADKADAWPLQLSGGQQQRVAIARALMMKPDVLLFDEPTAALDPEITNQVVK 182
           + +L  + L DKA+A+P  LSGGQ+QRVAIARAL M+PD++LFDEPT+ALDPE+   V+ 
Sbjct: 118 LALLTQVGLQDKANAYPSSLSGGQKQRVAIARALAMEPDLMLFDEPTSALDPEMVGDVLD 177

Query: 183 IIKELSGTGITQVVVTHEVDFAKKIASHVLYLEKGRIVEHG-THASFTHPQTQQFADYL 240
           ++K+L+  G+T V+VTHE+ FA+ ++  V++++ G +VE       FT P+  +   +L
Sbjct: 178 VMKDLAQKGMTMVIVTHEMGFARDVSDRVIFMDGGYVVESNIPEELFTRPKEARTQSFL 236