Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (404), Expect = 3e-44
 Identities = 92/246 (37%), Positives = 132/246 (53%), Gaps = 8/246 (3%)

Query: 3   KILLASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKC 62
           K+ L SL+   ++  AA+  ++  +EA Y PF     +N I GFD D+  ALC +++ +C
Sbjct: 9   KLGLVSLLAFGTSLQAAESSLRIGIEAAYPPFASKTPDNAIVGFDYDIGQALCAEMKVRC 68

Query: 63  SFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGKVADQ- 121
            +  Q FD LIPALK K+ DA IS+M IT  RL+ V+F++ YY   A  V   G   +  
Sbjct: 69  VWQEQEFDGLIPALKVKKVDAVISSMSITPERLKSVDFTDRYYRIPARLVFRKGSGINDI 128

Query: 122 -AALKGKRVGVQNGSTHQSFLLEQLSDVVA--VPYSSYQDAFIDMKNGRIDSVFGDTAVV 178
            A L GKR+GVQ  +    ++ +  +   A  V Y S  + F+D+  GR+D+    + V+
Sbjct: 129 PAQLNGKRIGVQRATNFDRYVTDHFAPAGAEVVRYGSQNEIFLDLLGGRLDATMASSVVI 188

Query: 179 AEWF---KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAA 235
            E        N+  +VG   T  QYFG G GIAV K N  L  + N AL  ++ NG Y  
Sbjct: 189 DESLLKRPEGNDFEFVGPNFTEEQYFGTGIGIAVRK-NDTLAGRFNQALATIRANGTYER 247

Query: 236 IFNKYF 241
           I  KYF
Sbjct: 248 IRQKYF 253