Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  155 bits (392), Expect = 7e-43
 Identities = 85/239 (35%), Positives = 136/239 (56%), Gaps = 11/239 (4%)

Query: 12  LVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSFHNQAFDS 71
           +++  + AQQ IKF ++ +Y PFE    +  + GFD+DL NALC +L  KC +  Q FD 
Sbjct: 16  IITPLSQAQQVIKFGVDPSYPPFEQKQPDGSLSGFDIDLGNALCAELSVKCIWVEQNFDG 75

Query: 72  LIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSL--AGKVADQAALKGKRV 129
           ++PALK K++DA +SA   TEAR +QV+FS+  Y   ++ V+   AG +   A+LKGK V
Sbjct: 76  MVPALKAKKFDAILSAFSATEARRQQVDFSHKIYTAPSSLVARKNAGLLPTAASLKGKSV 135

Query: 130 GVQNGSTHQSFLLEQLSD--VVAVPYSSYQDAFIDMKNGRIDSVF-----GDTAVVAEWF 182
           GV  GS  +SF   +     V  + Y +    F D+ NGR+++ F      D  ++ +  
Sbjct: 136 GVVQGSLQESFAKSEWGSQGVEILSYQTQDQVFSDLINGRLEAAFQASVQADIGLLQK-- 193

Query: 183 KGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFNKYF 241
                 A+ G+ +T+ +  G+G  I V K+   L +QLN A+  ++++G+Y  I  +YF
Sbjct: 194 PQGQGFAFAGDPITDKRIIGDGVAIGVRKNEPDLREQLNTAIAGIRQSGQYDRIAKQYF 252