Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas fluorescens FW300-N2E3

 Score =  167 bits (424), Expect = 1e-46
 Identities = 94/251 (37%), Positives = 145/251 (57%), Gaps = 10/251 (3%)

Query: 1   MKKILLASLIGL----VSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCK 56
           MKK+ L   + L     S+  AA++ ++  +EA Y PF     + +I GFD D+ NALC 
Sbjct: 1   MKKLPLIGGLALSLLACSSLFAAEKTLRIGIEAAYPPFASKTSDGKITGFDYDIGNALCA 60

Query: 57  QLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAG 116
           Q++ KC +    FD LIP+LK K+ DAA+S+M I E R + V+F++ YY  S+  V   G
Sbjct: 61  QMKVKCEWVEGEFDGLIPSLKVKKIDAALSSMTINEDRKKSVDFTHKYYFTSSRLVMKDG 120

Query: 117 KVADQ--AALKGKRVGVQNGSTHQSFLLE--QLSDVVAVPYSSYQDAFIDMKNGRIDSVF 172
            V D   A+LKGK +GVQ  +T   +  E  +   +    YS+ ++ ++D+  GR+D++F
Sbjct: 121 AVVDDQYASLKGKTIGVQRATTTDRYATEVFEPKGIKVARYSNNEEIYMDLAAGRLDAIF 180

Query: 173 GDTAVVAEWFK--GDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKEN 230
            DT  ++++         A+VG  + + +Y G G GIAV K N  L+ QLN A++ ++ N
Sbjct: 181 ADTIPLSDFLSMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVSQLNNAIDGIRAN 240

Query: 231 GEYAAIFNKYF 241
           GEY  I  KYF
Sbjct: 241 GEYQKIEAKYF 251