Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Pseudomonas fluorescens FW300-N1B4

 Score =  162 bits (409), Expect = 8e-45
 Identities = 91/251 (36%), Positives = 143/251 (56%), Gaps = 10/251 (3%)

Query: 1   MKKILLASLIGL----VSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCK 56
           MKK  L + + L     S+  AA+++++  +EA Y PF    +  +I GFD D+ NALC 
Sbjct: 1   MKKFPLITGLALSLLACSSLFAAEKDLRIGIEAAYPPFASKTDKGEIVGFDYDIGNALCA 60

Query: 57  QLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAG 116
           Q++ KC +    FD LIP+LK K+ D A+S+M I E R + V+F++ YY  S+  V   G
Sbjct: 61  QMKVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKDG 120

Query: 117 KVADQ--AALKGKRVGVQNGSTHQSFLLE--QLSDVVAVPYSSYQDAFIDMKNGRIDSVF 172
            V D   A+LKGK +GVQ  +T   +  E  +   +    Y + ++ ++D+  GR+D++F
Sbjct: 121 AVVDDQYASLKGKNIGVQRATTTDRYATEVFEPKGINVKRYGNNEEIYMDLAAGRLDAIF 180

Query: 173 GDTAVVAEW--FKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKEN 230
            DT  ++++         A+VG  + + +Y G G GIAV K N  L+  LN A++ ++ N
Sbjct: 181 ADTIPLSDFLAMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTQLVADLNKAIDEIRAN 240

Query: 231 GEYAAIFNKYF 241
           GEY  I  KYF
Sbjct: 241 GEYQKISQKYF 251