Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., amino acid ABC transporter substrate-binding protein, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  150 bits (379), Expect = 2e-41
 Identities = 85/249 (34%), Positives = 137/249 (55%), Gaps = 13/249 (5%)

Query: 2   KKILLASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAK 61
           KKILL +   L  + +A  + +K  +E  Y PF   D + Q+ GFD ++  ALC +++ +
Sbjct: 5   KKILLIAAATLAFSGSAFAETMKMGIEGAYPPFNNKDASGQVVGFDYEIGQALCAKMKVE 64

Query: 62  CSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGKVAD- 120
           C      +D +IPAL   ++D  IS++ ITE R + V+F+NPYY N   F++      D 
Sbjct: 65  CEAVTSDWDGIIPALMANKFDFLISSLSITEERKQVVDFTNPYYSNKLQFIAPKTSSIDV 124

Query: 121 ------QAALKGKRVGVQNGSTHQSFLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGD 174
                 + +L GK VG Q  +   ++L ++L  + A  Y + ++AF+D+ +GR+D++  D
Sbjct: 125 SSVEKAKESLAGKSVGAQRSTLAATWLEDKLGIMDAKLYDTQENAFLDLSSGRVDAMLAD 184

Query: 175 TAVVAEWFKGD--NNLAYVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGE 232
             V  EW K +   N  + GE V       +  GIAV K + AL ++LNAAL+ +  +G 
Sbjct: 185 KYVSFEWLKSEAGQNFEFKGEPVVE----DDKIGIAVRKGDDALRERLNAALKEIIADGT 240

Query: 233 YAAIFNKYF 241
           Y  I +KYF
Sbjct: 241 YKKINDKYF 249