Pairwise Alignments

Query, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  158 bits (400), Expect = 9e-44
 Identities = 82/240 (34%), Positives = 136/240 (56%), Gaps = 5/240 (2%)

Query: 7   ASLIGLVSASAAAQQEIKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQLEAKCSFHN 66
           A  + +   + A  +++    E  Y PF  ++ +  + GFD+D+A ALC++++A+C+F  
Sbjct: 14  AVFVLMAGVAMAEGEKVVIGTEGAYPPFNNLESDGTLTGFDIDIAKALCEEMKAECTFVT 73

Query: 67  QAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVSLAGK---VADQAA 123
           Q +D +IPAL  K++DA +++M ITE R +QV+F+N YY+   A V         A  AA
Sbjct: 74  QDWDGIIPALIAKKFDAIVASMSITEERKQQVDFTNKYYNTPPAIVVPKDSPITEATAAA 133

Query: 124 LKGKRVGVQNGSTHQSFLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAVVAEWFK 183
           L GK +G Q  +TH ++    + +     Y +  +  +D+ NGRID+   D  V++EW K
Sbjct: 134 LSGKALGAQGSTTHSNYAEAHMKESEVKLYPTADEYKLDLANGRIDAAIDDVVVLSEWLK 193

Query: 184 GDNNLA--YVGERVTNAQYFGNGFGIAVNKDNQALLDQLNAALEAVKENGEYAAIFNKYF 241
            ++      +G    +    G G GIA+ K + AL ++LN A+EA++ NG+Y  I  KYF
Sbjct: 194 TEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDALREKLNKAIEAIRANGKYKQINEKYF 253